RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 SERPINA6P08185 405 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 DEFA1P59665 94 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 DEFA3P59666 94 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 MRPS15P82914 257 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 CLEC16AQ2KHT3 1053 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 EP400NLQ6ZTU2 488 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 IRF2BP1Q8IU81 584 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 LARGE2Q8N3Y3 721 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 ZNF302Q9NR11 478 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 KIF17Q9P2E2 1029 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 C1orf167Q5SNV9 1468 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 C5orf60A6NFR6 353 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 TIMM44O43615 452 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 CAMTA2O94983 1202 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 RARAP10276 462 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 CCNHP51946 323 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 NCALDP61601 193 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 FAM83EQ2M2I3 478 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 EMC10Q5UCC4 262 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 ADCK1Q86TW2 530 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 FAM149B1Q96BN6 582 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 TLCD1Q96CP7 247 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 TRIM62Q9BVG3 475 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 NACA2Q9H009 215 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 POLR3FQ9H1D9 316 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 GANQ9H2C0 597 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 C6orf203Q9P0P8 240 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 ANGPTL3Q9Y5C1 460 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 CRYBG1Q9Y4K1 1723 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 TRIM49D1C9J1S8 452 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 M0QYV0 167 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 TCN1P20061 433 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 FASTKD1Q53R41 847 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 SEL1L3Q68CR1 1132 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 SWSAP1Q6NVH7 229 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 PSPC1Q8WXF1 523 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 MYRFQ9Y2G1 1151 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 ACTR2P61160 394 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 AAGABQ6PD74 315 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 KYAT3Q6YP21 454 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 STKLD1Q8NE28 680 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 TFB1MQ8WVM0 346 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 TMEM109Q9BVC6 243 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 DBNDD1Q9H9R9 158 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 SLC12A6Q9UHW9 1150 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 TMCO1Q9UM00 188 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 IVNS1ABPQ9Y6Y0 642 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 LOC100653049A0A140TA62 436 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 KRT34O76011 436 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 SRP72O76094 671 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 PMLP29590 882 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 HADHAP40939 763 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 ACOT2P49753 483 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 RAP1GDS1P52306 607 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 ADGRA1Q86SQ6 560 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 KATNAL2Q8IYT4 538 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 RDM1Q8NG50 284 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 KLF6Q99612 283 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 CNPY3Q9BT09 278 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 METTL5Q9NRN9 209 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 VTI1BQ9UEU0 232 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 DUOX1Q9NRD9 1551 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 NEMP1O14524 444 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 MTSS1O43312 755 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 ALBP02768 609 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 WDR72Q3MJ13 1102 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 MARK2Q7KZI7 788 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 MCOLN2Q8IZK6 566 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 PTPRN2Q92932 1015 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 DHX35Q9H5Z1 703 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 STAP1Q9ULZ2 295 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 USP18Q9UMW8 372 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 RIC1Q4ADV7 1423 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 IQCA1LA6NCM1 817 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 PRKAA2P54646 552 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 PRAMEP78395 509 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 NCOA4Q13772 614 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 OASLQ15646 514 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 KCNV1Q6PIU1 500 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 FAM71DQ8N9W8 422 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 PIWIL2Q8TC59 973 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 NSUN6Q8TEA1 469 aaKnown RBP4.97□□□□□ -1.61
CSMD3-203ENST00000343508 CASP10Q92851 521 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 C1orf50Q9BV19 199 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 KCTD10Q9H3F6 313 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 PARVBQ9HBI1 364 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 NMRK1Q9NWW6 199 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 UMODL1Q5DID0 1318 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 DPPA5A6NC42 116 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 MAGEB2O15479 319 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 SNX2O60749 519 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 GJB6O95452 261 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 MPOP05164 745 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 CCDC159P0C7I6 412 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 PDGFRAP16234 1089 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 BGNP21810 368 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 ACAP1Q15027 740 aa4.97□□□□□ -1.61
CSMD3-203ENST00000343508 SMTNL2Q2TAL5 461 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms