RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 ACAD11Q709F0 780 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 DHDDSQ86SQ9 333 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 PPM1NQ8N819 430 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 GRAPLQ8TC17 118 aaPredicted RBP15.55■□□□□ 0.08
CLCN1-201ENST00000343257 SLITRK1Q96PX8 696 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 PLA2G4CQ9UP65 541 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 TDRKHQ9Y2W6 561 aaKnown RBP15.55■□□□□ 0.08
CLCN1-201ENST00000343257 AK5Q9Y6K8 562 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 SMCHD1A6NHR9 2005 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 DOT1LQ8TEK3 1739 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 TAF1LQ8IZX4 1826 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 PABPC4LP0CB38 370 aaKnown RBP15.55■□□□□ 0.08
CLCN1-201ENST00000343257 UQCRBP14927 111 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 ZNF200P98182 395 aaPredicted RBP15.55■□□□□ 0.08
CLCN1-201ENST00000343257 LMNB2Q03252 620 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 HIC1Q14526 733 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 LIN9Q5TKA1 542 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 SDCCAG8Q86SQ7 713 aaPredicted RBP15.55■□□□□ 0.08
CLCN1-201ENST00000343257 OGFOD1Q8N543 542 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 EXD1Q8NHP7 514 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 PRPF31Q8WWY3 499 aaKnown RBP15.55■□□□□ 0.08
CLCN1-201ENST00000343257 TMEM206Q9H813 350 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 TRIM49D1C9J1S8 452 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 F8W8V4 182 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 FOSP01100 380 aaPredicted RBP15.54■□□□□ 0.08
CLCN1-201ENST00000343257 HLA-DOAP06340 250 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 IMPDH2P12268 514 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 PSMC5P62195 406 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 MAP3K10Q02779 954 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 GK3PQ14409 553 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 SLF2Q8IX21 1173 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 KATNAL2Q8IYT4 538 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 MZB1Q8WU39 189 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 CPT1BQ92523 772 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 SRPK1Q96SB4 655 aaKnown RBP15.54■□□□□ 0.08
CLCN1-201ENST00000343257 KLHL4Q9C0H6 718 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 C20orf27Q9GZN8 174 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 GGA1Q9UJY5 639 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 AGTPBP1Q9UPW5 1226 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 TRPA1O75762 1119 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 TMEM63AO94886 807 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 DESP17661 470 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 ELK3P41970 407 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 COG7P83436 770 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 TMEM270Q6UE05 265 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 SEPT12Q8IYM1 358 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLCN1-201ENST00000343257 LRRN4Q8WUT4 740 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 CLMNQ96JQ2 1002 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 MIS12Q9H081 205 aa15.54■□□□□ 0.08
CLCN1-201ENST00000343257 XPO7Q9UIA9 1087 aaKnown RBP15.54■□□□□ 0.08
CLCN1-201ENST00000343257 CAPN14A8MX76 684 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 P4HA2O15460 535 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 PSTPIP1O43586 416 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 NDUFB10O96000 172 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 FAM163BP0C2L3 166 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 FAM172AQ8WUF8 416 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 VTI1AQ96AJ9 217 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 ACSS3Q9H6R3 686 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 STRIP2Q9ULQ0 834 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 ZNF711Q9Y462 761 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 A0A088AWK7 358 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 C15orf38-AP3S2A0A0A6YYH1 394 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 SUPT3HO75486 399 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 LYPLA1O75608 230 aaPredicted RBP15.53■□□□□ 0.08
CLCN1-201ENST00000343257 PROCP04070 461 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 RAG1P15918 1043 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 CIITAP33076 1130 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 VCPP55072 806 aaKnown RBP15.53■□□□□ 0.08
CLCN1-201ENST00000343257 EFHC1Q5JVL4 640 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 PLA2G4FQ68DD2 849 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 SPOCD1Q6ZMY3 1216 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 ARPINQ7Z6K5 226 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 APOPT1Q96IL0 206 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 MCEEQ96PE7 176 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 FOXP3Q9BZS1 431 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 UBE4BO95155 1302 aa15.53■□□□□ 0.08
CLCN1-201ENST00000343257 A0A0J9YVX5 310 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 TOM1L1O75674 476 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 ETV4P43268 484 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 FOLH1Q04609 750 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 DLGAP5Q15398 846 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 KLHL38Q2WGJ6 581 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 ZNF394Q53GI3 561 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 MIER3Q7Z3K6 550 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 RSAD2Q8WXG1 361 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 E2F7Q96AV8 911 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 CNBD2Q96M20 576 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 FAM213AQ9BRX8 229 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 TRIM56Q9BRZ2 755 aaKnown RBP15.52■□□□□ 0.08
CLCN1-201ENST00000343257 POLLQ9UGP5 575 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 PCDHB4Q9Y5E5 795 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 STK24Q9Y6E0 443 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 KBTBD13C9JR72 458 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 UGT1A9O60656 530 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 MSX2P35548 267 aaPredicted RBP15.52■□□□□ 0.08
CLCN1-201ENST00000343257 OTUD4Q01804 1114 aaKnown RBP15.52■□□□□ 0.08
CLCN1-201ENST00000343257 DOK7Q18PE1 504 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 KLHDC10Q6PID8 442 aa15.52■□□□□ 0.08
CLCN1-201ENST00000343257 HPS6Q86YV9 775 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms