RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 SYNCQ9H7C4 482 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 HESX1Q9UBX0 185 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 USTQ9Y2C2 406 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 ZNF638Q14966 1978 aaKnown RBP18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 TCRBV7S2A1N4TA0A589 114 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 TARSL2A2RTX5 802 aaKnown RBP18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 CLDN5O00501 218 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 B3GAT3O94766 335 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 CYP11A1P05108 521 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 BCAT1P54687 386 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 BST2Q10589 180 aaKnown RBP18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 SIX1Q15475 284 aaPredicted RBP18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 TXNRD3NBQ6F5E7 133 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 CC2D1AQ6P1N0 951 aaPredicted RBP18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 OLFML1Q6UWY5 402 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 COLGALT2Q8IYK4 626 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 FNIP1Q8TF40 1166 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 TOX2Q96NM4 488 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 KRT12Q99456 494 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 HIPK3Q9H422 1215 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 TBC1D13Q9NVG8 400 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 ZNF446Q9NWS9 450 aa18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 MKI67P46013 3256 aaKnown RBP18.09■□□□□ 0.49
FRMD4A-202ENST00000342409 COL4A6Q14031 1691 aa18.08■□□□□ 0.49
FRMD4A-202ENST00000342409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 KRIT1O00522 736 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 PAPSS1O43252 624 aaPredicted RBP18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 PSTPIP1O43586 416 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 CYP2C18P33260 490 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 LHX1P48742 406 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 GATMP50440 423 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 CDR1P51861 262 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 CCL23P55773 120 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 SLC7A5Q01650 507 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 LONRF2Q1L5Z9 754 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 MDH1BQ5I0G3 518 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 C1orf53Q5VUE5 145 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 OR6B2Q6IFH4 312 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 WDR93Q6P2C0 686 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 DCLRE1AQ6PJP8 1040 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 ANKS1BQ7Z6G8 1248 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 IPO4Q8TEX9 1081 aaKnown RBP18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 RSPH1Q8WYR4 309 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 SEPT8Q92599 483 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 SYT15Q9BQS2 421 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 B3GNT5Q9BYG0 378 aa18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 ELAC1Q9H777 363 aaKnown RBP18.08■□□□□ 0.48
FRMD4A-202ENST00000342409 PTPRSQ13332 1948 aa18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 MYBPHLA2RUH7 354 aa18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 ZMYND10O75800 440 aa18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 BEST1O76090 585 aa18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 PIGHQ14442 188 aaPredicted RBP18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 TAF5Q15542 800 aa18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 ATP13A4Q4VNC1 1196 aa18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 FAM102AQ5T9C2 384 aaPredicted RBP18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 ADAT2Q7Z6V5 191 aaKnown RBP18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 SLC13A5Q86YT5 568 aaPredicted RBP18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 RHOT1Q8IXI2 618 aa18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 KLHL7Q8IXQ5 586 aa18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 SUSD3Q96L08 255 aa18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 HINFPQ9BQA5 517 aa18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 PPP1R12CQ9BZL4 782 aa18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 DDX47Q9H0S4 455 aaKnown RBP18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 DNAJB4Q9UDY4 337 aa18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 TBX21Q9UL17 535 aa18.07■□□□□ 0.48
FRMD4A-202ENST00000342409 ODC1P11926 461 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 PSMA2P25787 234 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 SCUBE3Q8IX30 993 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 KATNAL2Q8IYT4 538 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 CLEC4CQ8WTT0 213 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 APBB2Q92870 758 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 CASD1Q96PB1 797 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 PKMYT1Q99640 499 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 DUSP16Q9BY84 665 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 TMEM30AQ9NV96 361 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 ALPK3Q96L96 1907 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 C2CD4BA6NLJ0 364 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 DCDC2CA8MYV0 355 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 BHMG1C9JSJ3 638 aaPredicted RBP18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 CCDC188H7C350 402 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 RAD51CO43502 376 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 LRCH4O75427 683 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 FLT3P36888 993 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 PLA2G4AP47712 749 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 SLC6A3Q01959 620 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 SLC25A11Q02978 314 aaKnown RBP18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 BRD3Q15059 726 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 RAB6CQ53S08 254 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 SEL1L2Q5TEA6 688 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 C8orf74Q6P047 294 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 PRELID2Q8N945 189 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 SPATA18Q8TC71 538 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 RAB6CQ9H0N0 254 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 LCMT1Q9UIC8 334 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 CDH9Q9ULB4 789 aa18.06■□□□□ 0.48
FRMD4A-202ENST00000342409 ZSCAN5CA6NGD5 496 aaPredicted RBP18.05■□□□□ 0.48
FRMD4A-202ENST00000342409 FSCN2O14926 492 aa18.05■□□□□ 0.48
FRMD4A-202ENST00000342409 XPO1O14980 1071 aaKnown RBP18.05■□□□□ 0.48
FRMD4A-202ENST00000342409 GRAP2O75791 330 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms