RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 SYN2Q92777 582 aaPredicted RBP12.41□□□□□ -0.42
RTN3-203ENST00000341307 WDR11Q9BZH6 1224 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 UBN1Q9NPG3 1134 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.41□□□□□ -0.426e-7■■■■□ 22.6
RTN3-203ENST00000341307 CTDP1Q9Y5B0 961 aaPredicted RBP12.41□□□□□ -0.42
RTN3-203ENST00000341307 PCDHA3Q9Y5H8 950 aa12.41□□□□□ -0.42
RTN3-203ENST00000341307 SPECC1L-ADORA2AF8WAN1 911 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 MGEA5O60502 916 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 GAS7O60861 476 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 SLITRK3O94933 977 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 VDRP11473 427 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 ATP5DP30049 168 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 RAP1GDS1P52306 607 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 AQP4P55087 323 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 C1QTNF8P60827 252 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 MAPK7Q13164 816 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 LRP8Q14114 963 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 DHRS4L2Q6PKH6 230 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 CAPN12Q6ZSI9 719 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 NT5DC3Q86UY8 548 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 PRR11Q96HE9 360 aaPredicted RBP12.4□□□□□ -0.42
RTN3-203ENST00000341307 HES6Q96HZ4 224 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 CEP295NLQ96MC4 621 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 KLHL4Q9C0H6 718 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 DNAJC17Q9NVM6 304 aaKnown RBP12.4□□□□□ -0.42
RTN3-203ENST00000341307 QPCTLQ9NXS2 382 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 CEP72Q9P209 647 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 DNAJB4Q9UDY4 337 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 MTRF1LQ9UGC7 380 aaKnown RBP12.4□□□□□ -0.42
RTN3-203ENST00000341307 GRID1Q9ULK0 1009 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 ADGRA3Q8IWK6 1321 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 FAM47E-STBD1D6RA91 191 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 ATMINO43313 823 aaPredicted RBP12.4□□□□□ -0.42
RTN3-203ENST00000341307 ACSL3O95573 720 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 BAG2O95816 211 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 CETPP11597 493 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 MUTP22033 750 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 PRKCIP41743 596 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 VCPP55072 806 aaKnown RBP12.4□□□□□ -0.42
RTN3-203ENST00000341307 PSMC1P62191 440 aaKnown RBP12.4□□□□□ -0.42
RTN3-203ENST00000341307 LRRC63Q05C16 580 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 KYNUQ16719 465 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 ARL13BQ3SXY8 428 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 HSP90AA5PQ58FG0 334 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 PPP1R21Q6ZMI0 780 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 PYROXD1Q8WU10 500 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 ZC3H15Q8WU90 426 aaKnown RBP12.4□□□□□ -0.42
RTN3-203ENST00000341307 LPAR1Q92633 364 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 SLC5A5Q92911 643 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 PANX3Q96QZ0 392 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 HSD17B14Q9BPX1 270 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 IKZF4Q9H2S9 585 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 CDC42EP4Q9H3Q1 356 aaKnown RBP12.4□□□□□ -0.42
RTN3-203ENST00000341307 SLC38A10Q9HBR0 1119 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 FBXO9Q9UK97 447 aaPredicted RBP12.4□□□□□ -0.42
RTN3-203ENST00000341307 TMA7Q9Y2S6 64 aaKnown RBP12.4□□□□□ -0.42
RTN3-203ENST00000341307 RABGAP1Q9Y3P9 1069 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 RIPK3Q9Y572 518 aa12.4□□□□□ -0.42
RTN3-203ENST00000341307 CFAP69A5D8W1 941 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 TTLL13PA6NNM8 815 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 CELF2O95319 508 aaKnown RBP12.39□□□□□ -0.43
RTN3-203ENST00000341307 EIF2B2P49770 351 aaKnown RBP12.39□□□□□ -0.43
RTN3-203ENST00000341307 HSD17B4P51659 736 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 ARID5AQ03989 594 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 KCNA1Q09470 495 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 DHX34Q14147 1143 aaKnown RBP12.39□□□□□ -0.43
RTN3-203ENST00000341307 C16orf72Q14CZ0 275 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 ANKRD20A4Q4UJ75 823 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 TMEM63BQ5T3F8 832 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 RIPOR1Q6ZS17 1223 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 TRMT1LQ7Z2T5 733 aaKnown RBP12.39□□□□□ -0.43
RTN3-203ENST00000341307 ZNF410Q86VK4 478 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 LRRC6Q86X45 466 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 ATG4CQ96DT6 458 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 CDCA5Q96FF9 252 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 NSL1Q96IY1 281 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 FAM161BQ96MY7 647 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 ZHX2Q9Y6X8 837 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 A0A088AWK7 358 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 ANKRD63C9JTQ0 380 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 H3BSA7 217 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 ADCY6O43306 1168 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 PHF2O75151 1096 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 EIF2AK2P19525 551 aaKnown RBP12.39□□□□□ -0.43
RTN3-203ENST00000341307 HMGCS2P54868 508 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 AP2B1P63010 937 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 PLCB3Q01970 1234 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 ACAP1Q15027 740 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 LRRC36Q1X8D7 754 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 LMBRD2Q68DH5 695 aaPredicted RBP12.39□□□□□ -0.43
RTN3-203ENST00000341307 ISLR2Q6UXK2 745 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 RNF111Q6ZNA4 994 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 DCDC5Q6ZRR9 648 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 RGS9BPQ6ZS82 235 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 ANO5Q75V66 913 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 NLRX1Q86UT6 975 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 SRRM1Q8IYB3 904 aaKnown RBP12.39□□□□□ -0.43
RTN3-203ENST00000341307 LSM14AQ8ND56 463 aaKnown RBP12.39□□□□□ -0.43
RTN3-203ENST00000341307 CXorf38Q8TB03 319 aa12.39□□□□□ -0.43
RTN3-203ENST00000341307 RUNDC3BQ96NL0 473 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms