RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 SSU72Q9NP77 194 aaKnown RBP15.28■□□□□ 0.04
TDP2-201ENST00000341060 METTL5Q9NRN9 209 aaKnown RBP15.28■□□□□ 0.04
TDP2-201ENST00000341060 TNFSF13BQ9Y275 285 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 E7ESA3 106 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 GOLGA8MH3BSY2 632 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 BANF1O75531 89 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 ERBB2P04626 1255 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 GJB1P08034 283 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 PHBP35232 272 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 RPA3P35244 121 aaPredicted RBP15.27■□□□□ 0.04
TDP2-201ENST00000341060 ARL4CP56559 192 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 MYO1EQ12965 1108 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 ACAP1Q15027 740 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 FAM47EQ6ZV65 393 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 ASRGL1Q7L266 308 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 CDR2LQ86X02 465 aaPredicted RBP15.27■□□□□ 0.04
TDP2-201ENST00000341060 ANKMY2Q8IV38 441 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 TMEM192Q8IY95 271 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 C4orf33Q8N1A6 199 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 EMC1Q8N766 993 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 C1orf127Q8N9H9 656 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 ATP11CQ8NB49 1132 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 SLC4A11Q8NBS3 891 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 TRAPPC12Q8WVT3 735 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 KLHL29Q96CT2 875 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 FGD4Q96M96 766 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 SYNCQ9H7C4 482 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 BAIAP2L1Q9UHR4 511 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 RABGEF1Q9UJ41 708 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 PNMA3Q9UL41 463 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 GRID1Q9ULK0 1009 aa15.27■□□□□ 0.04
TDP2-201ENST00000341060 APOC4-APOC2K7ER74 178 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 SMAPO00193 183 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 IGF2BP3O00425 579 aaKnown RBP eCLIP15.26■□□□□ 0.03
TDP2-201ENST00000341060 APOC2P02655 101 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 NFICP08651 508 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 CD48P09326 243 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 CCNB1P14635 433 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 CA4P22748 312 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 GABRB2P47870 512 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 CDH8P55286 799 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 IRX3P78415 501 aaPredicted RBP15.26■□□□□ 0.03
TDP2-201ENST00000341060 GAD2Q05329 585 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 PTPN11Q06124 597 aaPredicted RBP15.26■□□□□ 0.03
TDP2-201ENST00000341060 PDE4CQ08493 712 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 DNAJC3Q13217 504 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 TMEM132AQ24JP5 1023 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 ZC3H12AQ5D1E8 599 aaKnown RBP15.26■□□□□ 0.03
TDP2-201ENST00000341060 ANKRD22Q5VYY1 191 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 CEP57Q86XR8 500 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 ANKLE1Q8NAG6 615 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 CMASQ8NFW8 434 aaPredicted RBP15.26■□□□□ 0.03
TDP2-201ENST00000341060 PYROXD1Q8WU10 500 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 RSAD2Q8WXG1 361 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 ZNF668Q96K58 619 aaPredicted RBP15.26■□□□□ 0.03
TDP2-201ENST00000341060 TACO1Q9BSH4 297 aaKnown RBP15.26■□□□□ 0.03
TDP2-201ENST00000341060 NFKBIZQ9BYH8 718 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 SDCBP2Q9H190 292 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 MINDY3Q9H8M7 445 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 ARHGEF3Q9NR81 526 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 ZMYND8Q9ULU4 1186 aaPredicted RBP15.26■□□□□ 0.03
TDP2-201ENST00000341060 PHTF1Q9UMS5 762 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 A0A1B0GUA9 196 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 CNMDO75829 334 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 ALADP13716 330 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 RPL22P35268 128 aaKnown RBP15.26■□□□□ 0.03
TDP2-201ENST00000341060 MOGSQ13724 837 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 MSS51Q4VC12 460 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 FNBP1LQ5T0N5 605 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 EFCAB12Q6NXP0 572 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 GADL1Q6ZQY3 521 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 SPOCK2Q92563 424 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 MCRS1Q96EZ8 462 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 SPATA33Q96N06 139 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 TWNKQ96RR1 684 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 WDR83Q9BRX9 315 aaKnown RBP15.26■□□□□ 0.03
TDP2-201ENST00000341060 R3HDMLQ9H3Y0 253 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 ACSS3Q9H6R3 686 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 C10orf88Q9H8K7 445 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 HMGXB4Q9UGU5 601 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.26■□□□□ 0.03
TDP2-201ENST00000341060 CSADQ9Y600 493 aa15.26■□□□□ 0.03
TDP2-201ENST00000341060 A0A1W2PPM1 405 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 CILPO75339 1184 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 RNF8O76064 485 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 SLC25A27O95847 323 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 ITGB3P05106 788 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 PGK2P07205 417 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 IQCF3P0C7M6 154 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 SSTR1P30872 391 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 CLCN3P51790 818 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 YARSP54577 528 aaKnown RBP15.25■□□□□ 0.03
TDP2-201ENST00000341060 ADGRD1Q6QNK2 874 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 DHX37Q8IY37 1157 aaKnown RBP15.25■□□□□ 0.03
TDP2-201ENST00000341060 KCTD6Q8NC69 237 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 CXorf38Q8TB03 319 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 TMEM176AQ96HP8 235 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 DHRS4Q9BTZ2 278 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 MAK16Q9BXY0 300 aaKnown RBP15.25■□□□□ 0.03
TDP2-201ENST00000341060 SMARCAD1Q9H4L7 1026 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms