RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 COL8A1P27658 744 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 MATKP42679 507 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 AMPD2Q01433 879 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 HLA-BQ31612 363 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 SLC36A4Q6YBV0 504 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 RGL4Q8IZJ4 473 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 BTBD6Q96KE9 485 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 FAM167AQ96KS9 214 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 NXF3Q9H4D5 531 aaKnown RBP12.35□□□□□ -0.43
ATXN3-201ENST00000340660 GABBR1Q9UBS5 961 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 AMPD1P23109 780 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 DCTP40126 519 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 ATP1A2P50993 1020 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 TUSC3Q13454 348 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 CCDC178Q5BJE1 867 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 GPR158Q5T848 1215 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 GAREM2Q75VX8 874 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 IQCA1Q86XH1 822 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 SLC7A3Q8WY07 619 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 SPOCK3Q9BQ16 436 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 KLK14Q9P0G3 267 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 PCDHA6Q9UN73 950 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 PCDHGA1Q9Y5H4 931 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 PCDHA8Q9Y5H6 950 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 CSMD2Q7Z408 3487 aa12.34□□□□□ -0.43
ATXN3-201ENST00000340660 MYH9P35579 1960 aaKnown RBP12.33□□□□□ -0.44
ATXN3-201ENST00000340660 IGHV1OR15-9A0A0B4J2B8 117 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 IGKV6-21A0A0C4DH24 114 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 SGK1O00141 431 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 ZNF213O14771 459 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 RAB11FIP3O75154 756 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 PCP11498 1178 aaKnown RBP12.33□□□□□ -0.44
ATXN3-201ENST00000340660 GNSP15586 552 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 WEE1P30291 646 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 AFMP43652 599 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 ARPP19P56211 112 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 PTH1RQ03431 593 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 TARBP2Q15633 366 aaKnown RBP12.33□□□□□ -0.44
ATXN3-201ENST00000340660 FBXL19Q6PCT2 694 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 ANKS3Q6ZW76 656 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 RIN3Q8TB24 985 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 ZNF578Q96N58 590 aaPredicted RBP12.33□□□□□ -0.44
ATXN3-201ENST00000340660 CEP89Q96ST8 783 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 DPH1Q9BZG8 443 aa12.33□□□□□ -0.44
ATXN3-201ENST00000340660 SUCLA2Q9P2R7 463 aaPredicted RBP12.33□□□□□ -0.44
ATXN3-201ENST00000340660 MSTNO14793 375 aa12.32□□□□□ -0.44
ATXN3-201ENST00000340660 RECQL4O94761 1208 aa12.32□□□□□ -0.44
ATXN3-201ENST00000340660 PROCP04070 461 aa12.32□□□□□ -0.44
ATXN3-201ENST00000340660 FAM87AP0C7U9 286 aa12.32□□□□□ -0.44
ATXN3-201ENST00000340660 ADH6P28332 368 aa12.32□□□□□ -0.44
ATXN3-201ENST00000340660 DGKGP49619 791 aa12.32□□□□□ -0.44
ATXN3-201ENST00000340660 USP11P51784 963 aa12.32□□□□□ -0.44
ATXN3-201ENST00000340660 PRKCEQ02156 737 aa12.32□□□□□ -0.44
ATXN3-201ENST00000340660 CEP55Q53EZ4 464 aa12.32□□□□□ -0.44
ATXN3-201ENST00000340660 ALLCQ8N6M5 410 aa12.32□□□□□ -0.44
ATXN3-201ENST00000340660 TXNDC5Q8NBS9 432 aaKnown RBP12.32□□□□□ -0.44
ATXN3-201ENST00000340660 ZNF419Q96HQ0 510 aaPredicted RBP12.32□□□□□ -0.44
ATXN3-201ENST00000340660 DNAJC25Q9H1X3 360 aa12.32□□□□□ -0.44
ATXN3-201ENST00000340660 NIPBLQ6KC79 2804 aaeCLIP12.31□□□□□ -0.44
ATXN3-201ENST00000340660 A0A1B0GTW7 788 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 TCRBV21S2A2A0A5A6 115 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 I3L4J1 428 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 IPO5O00410 1097 aaKnown RBP12.31□□□□□ -0.44
ATXN3-201ENST00000340660 MEIS1O00470 390 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 GRK6P43250 576 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 SKIDA1Q1XH10 827 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 XKR5Q6UX68 686 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 CD300LGQ6UXG3 332 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 ZCCHC9Q8N567 271 aaKnown RBP12.31□□□□□ -0.44
ATXN3-201ENST00000340660 IL17RCQ8NAC3 791 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 CCDC26Q8TAB7 109 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 EXOC4Q96A65 974 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 SEMA3CQ99985 751 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 ATXN3LQ9H3M9 355 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 SUV39H2Q9H5I1 410 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 FTSJ1Q9UET6 329 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 ZNF232Q9UNY5 417 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 CCL26Q9Y258 94 aa12.31□□□□□ -0.44
ATXN3-201ENST00000340660 ARID2Q68CP9 1835 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 A1L4Q6 167 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 SERTM1A2A2V5 107 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 SPDYE3A6NKU9 549 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 CBX4O00257 560 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 SMARCA5O60264 1052 aaPredicted RBP12.3□□□□□ -0.44
ATXN3-201ENST00000340660 RFPL3O75679 317 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 KLF8O95600 359 aaPredicted RBP12.3□□□□□ -0.44
ATXN3-201ENST00000340660 PSAPP07602 524 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 DNAJC3Q13217 504 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 NAB2Q15742 525 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 UGCGQ16739 394 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 ZNF468Q5VIY5 522 aaPredicted RBP12.3□□□□□ -0.44
ATXN3-201ENST00000340660 IL27RAQ6UWB1 636 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 SFTPA1Q8IWL2 248 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 EXTL1Q92935 676 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 CPB2Q96IY4 423 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 SH2D3AQ9BRG2 576 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 TSPAN10Q9H1Z9 355 aaPredicted RBP12.3□□□□□ -0.44
ATXN3-201ENST00000340660 ECT2Q9H8V3 914 aa12.3□□□□□ -0.44
ATXN3-201ENST00000340660 PSTPIP2Q9H939 334 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms