RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CSH1P0DML2 217 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 CSH2P0DML3 217 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 TRIM21P19474 475 aaKnown RBP16.2■□□□□ 0.18
UBE3B-201ENST00000340074 ANXA13P27216 316 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 GABRR2P28476 465 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 RAD23BP54727 409 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 TEAD2Q15562 447 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 ANO6Q4KMQ2 910 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 VWA3BQ502W6 1294 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 GAREM2Q75VX8 874 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 RRAGAQ7L523 313 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 FAM35AQ86V20 835 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 ARHGEF19Q8IW93 802 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 SHKBP1Q8TBC3 707 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 SLC2A14Q8TDB8 520 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 SMARCD1Q96GM5 515 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 FAM124BQ9H5Z6 455 aaPredicted RBP16.2■□□□□ 0.18
UBE3B-201ENST00000340074 KCNK12Q9HB15 430 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 FANCLQ9NW38 375 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 ATP8B3O60423 1300 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 SYCE3A1L190 88 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 LETM1O95202 739 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-201ENST00000340074 EEF1GP26641 437 aaKnown RBP16.19■□□□□ 0.18
UBE3B-201ENST00000340074 YWHAEP62258 255 aaKnown RBP16.19■□□□□ 0.18
UBE3B-201ENST00000340074 MYL5Q02045 173 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 MIIPQ5JXC2 388 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 CDKAL1Q5VV42 579 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 PHLDB3Q6NSJ2 640 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 UBR7Q8N806 425 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 SLC4A11Q8NBS3 891 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 RSAD2Q8WXG1 361 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 KAT5Q92993 513 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 CYFIP2Q96F07 1278 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 TMEM176AQ96HP8 235 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 SPATA17Q96L03 361 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 C8orf48Q96LL4 319 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 KCNK16Q96T55 309 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 DNAI2Q9GZS0 605 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 ATXN3LQ9H3M9 355 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 NDST4Q9H3R1 872 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 IL21Q9HBE4 155 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 KRT82Q9NSB4 513 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 GDE1Q9NZC3 331 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 HELZP42694 1942 aaKnown RBP16.19■□□□□ 0.18
UBE3B-201ENST00000340074 GTPBP10A4D1E9 387 aaKnown RBP16.19■□□□□ 0.18
UBE3B-201ENST00000340074 PES1O00541 588 aaKnown RBP16.19■□□□□ 0.18
UBE3B-201ENST00000340074 DCXO43602 365 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 NOL4O94818 638 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 FGF19O95750 216 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 SLC9A1P19634 815 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 ADORA2BP29275 332 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 PTPN21Q16825 1174 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 EXOC3L4Q17RC7 722 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 SKOR2Q2VWA4 1001 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-201ENST00000340074 STXBP5Q5T5C0 1151 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 TRIM65Q6PJ69 517 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 PARM1Q6UWI2 310 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 GBP6Q6ZN66 633 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 FGF14Q92915 247 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 MYRFLQ96LU7 910 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 HEXIM2Q96MH2 286 aaKnown RBP16.19■□□□□ 0.18
UBE3B-201ENST00000340074 ZSWIM3Q96MP5 696 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 HNRNPABQ99729 332 aaKnown RBP16.19■□□□□ 0.18
UBE3B-201ENST00000340074 FUCA2Q9BTY2 467 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 NAT10Q9H0A0 1025 aaKnown RBP16.19■□□□□ 0.18
UBE3B-201ENST00000340074 EPHX3Q9H6B9 360 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 TAB2Q9NYJ8 693 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 IGSF9Q9P2J2 1179 aa16.19■□□□□ 0.18
UBE3B-201ENST00000340074 ANHXE9PGG2 379 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 PI4K2BG5E9Z4 385 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 AP1G2O75843 785 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 BEST1O76090 585 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 F11P03951 625 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 ACO1P21399 889 aaKnown RBP16.18■□□□□ 0.18
UBE3B-201ENST00000340074 PON1P27169 355 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 CDC25CP30307 473 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 USP46P62068 366 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 CYP4F8P98187 520 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 APBA1Q02410 837 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 GCNT1Q02742 428 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 HTR4Q13639 388 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 NCAPHQ15003 741 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 PPP1R26Q5T8A7 1209 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-201ENST00000340074 DENND5BQ6ZUT9 1274 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 TMEM150AQ86TG1 271 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 AOPEPQ8N6M6 819 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 TRMT2BQ96GJ1 504 aaKnown RBP16.18■□□□□ 0.18
UBE3B-201ENST00000340074 CEP295NLQ96MC4 621 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 KREMEN1Q96MU8 473 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 SMOC2Q9H3U7 446 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 SLITRK6Q9H5Y7 841 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 UBE2TQ9NPD8 197 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-201ENST00000340074 DMAP1Q9NPF5 467 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-201ENST00000340074 UXTQ9UBK9 157 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-201ENST00000340074 SORCS3Q9UPU3 1222 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 NUMBLQ9Y6R0 609 aa16.18■□□□□ 0.18
UBE3B-201ENST00000340074 FAM200BP0CF97 657 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 ALADP13716 330 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 MAP3K7CLP57077 242 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 KRT31Q15323 416 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms