RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CBWD2Q8IUF1 395 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 HSCBQ8IWL3 235 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 OR5B17Q8NGF7 314 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 TRMT2BQ96GJ1 504 aaKnown RBP11.41□□□□□ -0.58
CAPN3-202ENST00000337571 MYRFLQ96LU7 910 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 C7orf25Q9BPX7 421 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 FAM83CQ9BQN1 747 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 SNX25Q9H3E2 840 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 EBF3Q9H4W6 596 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 MAGEF1Q9HAY2 307 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 SIX4Q9UIU6 781 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 CFAP45Q9UL16 551 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 CCL26Q9Y258 94 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 PHACTR2O75167 634 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 ATP2C2O75185 946 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 CLSTN1O94985 981 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 TDGF1P13385 188 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 HDCP19113 662 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 LMO2P25791 158 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 GNL1P36915 607 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-202ENST00000337571 MAGEA11P43364 429 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 CYP2J2P51589 502 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 TNNC1P63316 161 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 NR1H3Q13133 447 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 TRPC3Q13507 836 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 CCINQ13939 588 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 GAS6Q14393 721 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 KCNB1Q14721 858 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 ATL3Q6DD88 541 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 CNNM4Q6P4Q7 775 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 FAM171BQ6P995 826 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 SHC4Q6S5L8 630 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 VSTM1Q6UX27 236 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 Q6ZS52 159 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 TRAPPC11Q7Z392 1133 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-202ENST00000337571 OSTM1Q86WC4 334 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 CEP57L1Q8IYX8 460 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 CPA6Q8N4T0 437 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 XXYLT1Q8NBI6 393 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 STKLD1Q8NE28 680 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 GLIS3Q8NEA6 775 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 CXorf38Q8TB03 319 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 SNX21Q969T3 373 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 CCDC127Q96BQ5 260 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 CEP295NLQ96MC4 621 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 CYP2S1Q96SQ9 504 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 SYT15Q9BQS2 421 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 DUS2Q9NX74 493 aaKnown RBP11.4□□□□□ -0.58
CAPN3-202ENST00000337571 CGNQ9P2M7 1197 aaKnown RBP11.4□□□□□ -0.58
CAPN3-202ENST00000337571 CDV3Q9UKY7 258 aaKnown RBP11.4□□□□□ -0.58
CAPN3-202ENST00000337571 SLC8A2Q9UPR5 921 aa11.4□□□□□ -0.58
CAPN3-202ENST00000337571 UBE4BO95155 1302 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 TRDMT1O14717 391 aaKnown RBP11.39□□□□□ -0.59
CAPN3-202ENST00000337571 CLIC2O15247 247 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 HRO43593 1189 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 PAPSS2O95340 614 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-202ENST00000337571 RETP07949 1114 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 FAM163BP0C2L3 166 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 ZSCAN22P10073 491 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-202ENST00000337571 HOXB3P14651 431 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-202ENST00000337571 DRD1P21728 446 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 WARSP23381 471 aaKnown RBP11.39□□□□□ -0.59
CAPN3-202ENST00000337571 BDNFP23560 247 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 HOXD13P35453 343 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 IFNAR2P48551 515 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 PSMC1P62191 440 aaKnown RBP11.39□□□□□ -0.59
CAPN3-202ENST00000337571 FAM160A1Q05DH4 1040 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 SPEM2Q0P670 501 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 MTF1Q14872 753 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 WDR72Q3MJ13 1102 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 TMEM196Q5HYL7 178 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 SCARA3Q6AZY7 606 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 TRIM68Q6AZZ1 485 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 UNC13DQ70J99 1090 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 EPM2AIP1Q7L775 607 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-202ENST00000337571 NELFCDQ8IXH7 590 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 OR6B3Q8NGW1 331 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 MYCBPAPQ8TBZ2 947 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 ATP2A3Q93084 1043 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 FAM84AQ96KN4 292 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 SPATA17Q96L03 361 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 PKMYT1Q99640 499 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 BLZF1Q9H2G9 400 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 AGPAT3Q9NRZ7 376 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 DLL3Q9NYJ7 618 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 TRPM5Q9NZQ8 1165 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 EP300Q09472 2414 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-202ENST00000337571 F5P12259 2224 aa11.39□□□□□ -0.59
CAPN3-202ENST00000337571 PTPRJQ12913 1337 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 OBSL1O75147 1896 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 PVALEFA0A1B0GWK0 134 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 K7ESF4 209 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 TRIM66O15016 1216 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 HCRTO43612 131 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 FOXD2O60548 495 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-202ENST00000337571 EXOC3O60645 756 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 LRP3O75074 770 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 ABL1P00519 1130 aa11.38□□□□□ -0.59
CAPN3-202ENST00000337571 CST3P01034 146 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms