RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 PCP11498 1178 aaKnown RBP11.57□□□□□ -0.56
SEC23B-202ENST00000336714 TAS2R40P59535 323 aa11.57□□□□□ -0.56
SEC23B-202ENST00000336714 CAV1Q03135 178 aa11.57□□□□□ -0.56
SEC23B-202ENST00000336714 ITGA9Q13797 1035 aa11.57□□□□□ -0.56
SEC23B-202ENST00000336714 ANKRD22Q5VYY1 191 aa11.57□□□□□ -0.56
SEC23B-202ENST00000336714 SLC2A7Q6PXP3 512 aa11.57□□□□□ -0.56
SEC23B-202ENST00000336714 NUP93Q8N1F7 819 aa11.57□□□□□ -0.56
SEC23B-202ENST00000336714 DEPTORQ8TB45 409 aa11.57□□□□□ -0.56
SEC23B-202ENST00000336714 DIS3LQ8TF46 1054 aaKnown RBP11.57□□□□□ -0.56
SEC23B-202ENST00000336714 PKD2L1Q9P0L9 805 aa11.57□□□□□ -0.56
SEC23B-202ENST00000336714 SOX13Q9UN79 622 aa11.57□□□□□ -0.56
SEC23B-202ENST00000336714 DMTF1Q9Y222 760 aa11.57□□□□□ -0.56
SEC23B-202ENST00000336714 NOP56O00567 594 aaKnown RBP11.56□□□□□ -0.56
SEC23B-202ENST00000336714 ADAM23O75077 832 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 FKBP6O75344 327 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 FDX1P10109 184 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 TCF4P15884 667 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 PSMC1P62191 440 aaKnown RBP11.56□□□□□ -0.56
SEC23B-202ENST00000336714 PRAMEP78395 509 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 MYBPC1Q00872 1141 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 PTK7Q13308 1070 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 HIF1AQ16665 826 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 DNAL1Q4LDG9 190 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 ODR4Q5SWX8 454 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 VWA5B1Q5TIE3 1220 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 C16orf87Q6PH81 154 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 FAM178BQ8IXR5 827 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 FBXO36Q8NEA4 188 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 GABPB2Q8TAK5 448 aaPredicted RBP11.56□□□□□ -0.56
SEC23B-202ENST00000336714 CASP10Q92851 521 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 HEPHQ9BQS7 1158 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 C11orf70Q9BRQ4 267 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 PI4K2AQ9BTU6 479 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 FAIMQ9NVQ4 179 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.568e-7■□□□□ 11.2
SEC23B-202ENST00000336714 NDUFA13Q9P0J0 144 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 SENP1Q9P0U3 644 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 COL1A1P02452 1464 aaPredicted RBP11.56□□□□□ -0.56
SEC23B-202ENST00000336714 USP17L10C9JJH3 530 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 OXSR1O95747 527 aaPredicted RBP11.56□□□□□ -0.56
SEC23B-202ENST00000336714 UBXN2AP68543 259 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 USH1GQ495M9 461 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 HSF5Q4G112 596 aaPredicted RBP11.56□□□□□ -0.56
SEC23B-202ENST00000336714 TXNRD3Q86VQ6 643 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 PPM1NQ8N819 430 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 DQX1Q8TE96 717 aaKnown RBP11.56□□□□□ -0.56
SEC23B-202ENST00000336714 PIGBQ92521 554 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 LRGUKQ96M69 825 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 PPP1R10Q96QC0 940 aaKnown RBP11.56□□□□□ -0.56
SEC23B-202ENST00000336714 SEMA6AQ9H2E6 1030 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 PLA2G4CQ9UP65 541 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 TBC1D30Q9Y2I9 924 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 HBS1LQ9Y450 684 aaKnown RBP11.56□□□□□ -0.56
SEC23B-202ENST00000336714 MYH11P35749 1972 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 COPEO14579 308 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 DNAJA2O60884 412 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 SEC24DO94855 1032 aaPredicted RBP11.56□□□□□ -0.56
SEC23B-202ENST00000336714 INHBAP08476 426 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 CDH2P19022 906 aaPredicted RBP11.56□□□□□ -0.56
SEC23B-202ENST00000336714 BASP1P80723 227 aaKnown RBP11.56□□□□□ -0.56
SEC23B-202ENST00000336714 KRT72Q14CN4 511 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 GRIK5Q16478 980 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 LRRC43Q8N309 656 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 CFAP36Q96G28 342 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 TIMMDC1Q9NPL8 285 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 OLFML3Q9NRN5 406 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 HOMER2Q9NSB8 354 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 HERC5Q9UII4 1024 aaKnown RBP11.56□□□□□ -0.56
SEC23B-202ENST00000336714 COQ6Q9Y2Z9 468 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 RABGAP1Q9Y3P9 1069 aa11.56□□□□□ -0.56
SEC23B-202ENST00000336714 TIAM2Q8IVF5 1701 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 MARF1Q9Y4F3 1742 aaKnown RBP11.55□□□□□ -0.56
SEC23B-202ENST00000336714 RCVRNP35243 200 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 HDAC4P56524 1084 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 FMO1Q01740 532 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 OTUD4Q01804 1114 aaKnown RBP11.55□□□□□ -0.56
SEC23B-202ENST00000336714 PRKD1Q15139 912 aaPredicted RBP11.55□□□□□ -0.56
SEC23B-202ENST00000336714 EML3Q32P44 896 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 DCAF6Q58WW2 860 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 FNBP1LQ5T0N5 605 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 MAP3K21Q5TCX8 1036 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 ZNF410Q86VK4 478 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 CLVS1Q8IUQ0 354 aaPredicted RBP11.55□□□□□ -0.56
SEC23B-202ENST00000336714 ZNF276Q8N554 614 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 C12orf50Q8NA57 414 aaPredicted RBP11.55□□□□□ -0.56
SEC23B-202ENST00000336714 CCDC28BQ9BUN5 200 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 VPS51Q9UID3 782 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 CLUHO75153 1309 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 ZNF76P36508 570 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 CDK8P49336 464 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 BFSP1Q12934 665 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 BANPQ8N9N5 519 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 ZNF398Q8TD17 642 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 USP13Q92995 863 aaPredicted RBP11.55□□□□□ -0.56
SEC23B-202ENST00000336714 C20orf27Q9GZN8 174 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 ACSS2Q9NR19 701 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 MAN1C1Q9NR34 630 aa11.55□□□□□ -0.56
SEC23B-202ENST00000336714 RSL24D1Q9UHA3 163 aaKnown RBP11.55□□□□□ -0.56
SEC23B-202ENST00000336714 GNEQ9Y223 722 aaKnown RBP11.55□□□□□ -0.56
SEC23B-202ENST00000336714 POMPQ9Y244 141 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms