RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 KLRC2P26717 231 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 NUMBP49757 651 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 PDAP1Q13442 181 aaKnown RBP15.65■□□□□ 0.1
C9orf47-201ENST00000334490 RIN2Q8WYP3 895 aaPredicted RBP15.65■□□□□ 0.1
C9orf47-201ENST00000334490 HIST1H2AHQ96KK5 128 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 HIST1H2AJQ99878 128 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 H2AFJQ9BTM1 129 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 DCTN4Q9UJW0 460 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 NR2E3Q9Y5X4 410 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 MROH7Q68CQ1 1323 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 RAD51CO43502 376 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 LBX2Q6XYB7 198 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 NT5DC4Q86YG4 428 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 EFHD1Q9BUP0 239 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 SLC4A7Q9Y6M7 1214 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 DUSP10Q9Y6W6 482 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 PSTPIP1O43586 416 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 DIAPH2O60879 1101 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 CCL23P55773 120 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 USP10Q14694 798 aaKnown RBP15.64■□□□□ 0.09
C9orf47-201ENST00000334490 SYTL3Q4VX76 610 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 COBLL1Q53SF7 1204 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 UCMAQ8WVF2 138 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 DUSP9Q99956 384 aaKnown RBP15.64■□□□□ 0.09
C9orf47-201ENST00000334490 FAM96AQ9H5X1 160 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 PDGFCQ9NRA1 345 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 STIP1P31948 543 aaKnown RBP15.64■□□□□ 0.09
C9orf47-201ENST00000334490 E2F4Q16254 413 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 PLPPR4Q7Z2D5 763 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 HAUS8Q9BT25 410 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 TMEM134Q9H6X4 195 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 C20orf96Q9NUD7 363 aaPredicted RBP15.64■□□□□ 0.09
C9orf47-201ENST00000334490 CFAP99D6REC4 459 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 SYF2O95926 243 aaKnown RBP15.64■□□□□ 0.09
C9orf47-201ENST00000334490 FAXCQ5TGI0 409 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 EDEM1Q92611 657 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 RIPK3Q9Y572 518 aa15.64■□□□□ 0.09
C9orf47-201ENST00000334490 A0A1B0GUA9 196 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 POLBP06746 335 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 SCNN1GP51170 649 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 POLD3Q15054 466 aaPredicted RBP15.63■□□□□ 0.09
C9orf47-201ENST00000334490 ANKRD23Q86SG2 305 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 ITIH5Q86UX2 942 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 RAB42Q8N4Z0 105 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 ARHGAP20Q9P2F6 1191 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 AP4E1Q9UPM8 1137 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 HES2Q9Y543 173 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 NFKBIEO00221 500 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 TMCC1O94876 653 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 GCNT1Q02742 428 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 CCDC15Q0P6D6 951 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 TRMT10CQ7L0Y3 403 aaKnown RBP15.63■□□□□ 0.09
C9orf47-201ENST00000334490 ATP6V1G3Q96LB4 118 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 ERP44Q9BS26 406 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 TMEM247A6NEH6 219 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 LRRIQ3A6PVS8 624 aaPredicted RBP15.63■□□□□ 0.09
C9orf47-201ENST00000334490 MAFO75444 373 aaPredicted RBP15.63■□□□□ 0.09
C9orf47-201ENST00000334490 ANXA9O76027 345 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 MAP4P27816 1152 aaKnown RBP15.63■□□□□ 0.09
C9orf47-201ENST00000334490 COILP38432 576 aaPredicted RBP15.63■□□□□ 0.09
C9orf47-201ENST00000334490 PDK2Q15119 407 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 FSCBQ5H9T9 825 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 DDX42Q86XP3 938 aaKnown RBP eCLIP15.63■□□□□ 0.09
C9orf47-201ENST00000334490 CARNMT1Q8N4J0 409 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 CCDC33Q8N5R6 958 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 PDZD8Q8NEN9 1154 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 AGR3Q8TD06 166 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.63■□□□□ 0.09
C9orf47-201ENST00000334490 ZNF669Q96BR6 464 aaPredicted RBP15.63■□□□□ 0.09
C9orf47-201ENST00000334490 TRABDQ9H4I3 376 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 ALG13Q9NP73 1137 aaKnown RBP15.63■□□□□ 0.09
C9orf47-201ENST00000334490 NMRK2Q9NPI5 230 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 SENP1Q9P0U3 644 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 CDH16O75309 829 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 DCTN3O75935 186 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 RALBP11234 206 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 ELNP15502 786 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 ITGA8P53708 1063 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 MRPS6P82932 125 aaKnown RBP15.63■□□□□ 0.09
C9orf47-201ENST00000334490 KYNUQ16719 465 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 C3orf62Q6ZUJ4 267 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 ARHGEF19Q8IW93 802 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 FOPNLQ96NB1 174 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 DEFB118Q96PH6 123 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 OSGEPQ9NPF4 335 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 DOLKQ9UPQ8 538 aa15.63■□□□□ 0.09
C9orf47-201ENST00000334490 ATRNO75882 1429 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 STX7O15400 261 aaKnown RBP15.62■□□□□ 0.09
C9orf47-201ENST00000334490 ENDOD1O94919 500 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 CLEC16AQ2KHT3 1053 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 NT5DC1Q5TFE4 455 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 SPRYD7Q5W111 196 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 PTRHD1Q6GMV3 140 aaKnown RBP15.62■□□□□ 0.09
C9orf47-201ENST00000334490 SH3BP5LQ7L8J4 393 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 MTMR14Q8NCE2 650 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 CALML6Q8TD86 181 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 SPDL1Q96EA4 605 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 SERPINI1Q99574 410 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 FOXP3Q9BZS1 431 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 TLR8Q9NR97 1041 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms