RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 NOL4O94818 638 aa14.89□□□□□ -0.03
LIMS1-201ENST00000332345 MTIF2P46199 727 aaKnown RBP14.89□□□□□ -0.03
LIMS1-201ENST00000332345 SIGLEC14Q08ET2 396 aa14.89□□□□□ -0.03
LIMS1-201ENST00000332345 CUL2Q13617 745 aa14.89□□□□□ -0.03
LIMS1-201ENST00000332345 TRIM67Q6ZTA4 783 aa14.89□□□□□ -0.03
LIMS1-201ENST00000332345 TRMT2BQ96GJ1 504 aaKnown RBP14.89□□□□□ -0.03
LIMS1-201ENST00000332345 MYRFLQ96LU7 910 aa14.89□□□□□ -0.03
LIMS1-201ENST00000332345 HEXIM2Q96MH2 286 aaKnown RBP14.89□□□□□ -0.03
LIMS1-201ENST00000332345 NT5C1BQ96P26 610 aa14.89□□□□□ -0.03
LIMS1-201ENST00000332345 ZFP14Q9HCL3 533 aa14.89□□□□□ -0.03
LIMS1-201ENST00000332345 PTPRDP23468 1912 aa14.89□□□□□ -0.03
LIMS1-201ENST00000332345 TRIOO75962 3097 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 SOBPA7XYQ1 873 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 F8VP50 259 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 ECI2O75521 394 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 F11P03951 625 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 DDX6P26196 483 aaKnown RBP eCLIP14.88□□□□□ -0.03
LIMS1-201ENST00000332345 LRMPQ12912 555 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 ORC1Q13415 861 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 FAM78AQ5JUQ0 283 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 TMEM31Q5JXX7 168 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 DENND5BQ6ZUT9 1274 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 PAQR9Q6ZVX9 377 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 IRF2BP1Q8IU81 584 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 C12orf29Q8N999 325 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 ZSCAN18Q8TBC5 510 aaPredicted RBP14.88□□□□□ -0.03
LIMS1-201ENST00000332345 ENOX1Q8TC92 643 aaKnown RBP14.88□□□□□ -0.03
LIMS1-201ENST00000332345 WHAMMQ8TF30 809 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 FGF14Q92915 247 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 SMARCD2Q92925 531 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 E2F7Q96AV8 911 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 ELSPBP1Q96BH3 223 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 CYFIP2Q96F07 1278 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 SMARCD1Q96GM5 515 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 TMEM176AQ96HP8 235 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 ZSWIM3Q96MP5 696 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 ASB16Q96NS5 453 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 ZNF518BQ9C0D4 1074 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 TASP1Q9H6P5 420 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 TRPV4Q9HBA0 871 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 IL21Q9HBE4 155 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 HMGXB4Q9UGU5 601 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 DUSP12Q9UNI6 340 aa14.88□□□□□ -0.03
LIMS1-201ENST00000332345 AP1G2O75843 785 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 SRFP11831 508 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 PRKCSHP14314 528 aaPredicted RBP14.87□□□□□ -0.03
LIMS1-201ENST00000332345 PPP3CCP48454 512 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 STX1AQ16623 288 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 ZNF394Q53GI3 561 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 GPR158Q5T848 1215 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 TANGO2Q6ICL3 276 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 FAM35AQ86V20 835 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 FUKQ8N0W3 1084 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 NUP93Q8N1F7 819 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 LMO3Q8TAP4 145 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 SLC2A14Q8TDB8 520 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 MRPS31Q92665 395 aaKnown RBP14.87□□□□□ -0.03
LIMS1-201ENST00000332345 TWNKQ96RR1 684 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 HNRNPABQ99729 332 aaKnown RBP14.87□□□□□ -0.03
LIMS1-201ENST00000332345 RPP25Q9BUL9 199 aaKnown RBP14.87□□□□□ -0.03
LIMS1-201ENST00000332345 DMAP1Q9NPF5 467 aaPredicted RBP14.87□□□□□ -0.03
LIMS1-201ENST00000332345 GREB1Q4ZG55 1949 aa14.87□□□□□ -0.03
LIMS1-201ENST00000332345 DENND4CQ5VZ89 1909 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 ZNF638Q14966 1978 aaKnown RBP14.86□□□□□ -0.03
LIMS1-201ENST00000332345 TMEM221A6NGB7 291 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 PRR33A8MZF0 331 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 M0R296 226 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 NRG2O14511 850 aaPredicted RBP14.86□□□□□ -0.03
LIMS1-201ENST00000332345 RTN3O95197 1032 aaPredicted RBP14.86□□□□□ -0.03
LIMS1-201ENST00000332345 LETM1O95202 739 aaPredicted RBP14.86□□□□□ -0.03
LIMS1-201ENST00000332345 FAM200BP0CF97 657 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 CCDC130P13994 396 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 WEE1P30291 646 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 RAD23BP54727 409 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 MAN2A1Q16706 1144 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 CAVIN1Q6NZI2 390 aaKnown RBP14.86□□□□□ -0.03
LIMS1-201ENST00000332345 POTEHQ6S545 545 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 GBP6Q6ZN66 633 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 ARID3BQ8IVW6 561 aaPredicted RBP14.86□□□□□ -0.03
LIMS1-201ENST00000332345 PPM1KQ8N3J5 372 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 ST13P5Q8NFI4 369 aaPredicted RBP14.86□□□□□ -0.03
LIMS1-201ENST00000332345 FAM81BQ96LP2 452 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 KCNK16Q96T55 309 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 ARID3AQ99856 593 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 KXD1Q9BQD3 176 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 FAM49BQ9NUQ9 324 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 COMMD8Q9NX08 183 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 TRPM5Q9NZQ8 1165 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 TMEM63CQ9P1W3 806 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 FBXL21Q9UKT6 434 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 KIAA1257Q9ULG3 409 aa14.86□□□□□ -0.03
LIMS1-201ENST00000332345 GTPBP10A4D1E9 387 aaKnown RBP14.85□□□□□ -0.03
LIMS1-201ENST00000332345 DPYSL4O14531 572 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 EEF1GP26641 437 aaKnown RBP14.85□□□□□ -0.03
LIMS1-201ENST00000332345 YWHAQP27348 245 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 ADORA2BP29275 332 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 CACNA2D1P54289 1103 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 CYP4F8P98187 520 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 GCNT1Q02742 428 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 BMP8AQ7Z5Y6 402 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms