RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.76□□□□□ -1.01
SKA2-201ENST00000330137 FOXN3O00409 490 aaPredicted RBP8.76□□□□□ -1.01
SKA2-201ENST00000330137 LPXNO60711 386 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 DKC1O60832 514 aaKnown RBP eCLIP8.76□□□□□ -1.01
SKA2-201ENST00000330137 RSPH10BP0C881 870 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 RPA1P27694 616 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 TMED10P49755 219 aaKnown RBP8.76□□□□□ -1.01
SKA2-201ENST00000330137 OVGP1Q12889 678 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 CNGA3Q16281 694 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 CAVIN4Q5BKX8 364 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 PPP1R2P3Q6NXS1 205 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 RNF111Q6ZNA4 994 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 KATNAL2Q8IYT4 538 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 PQLC1Q8N2U9 271 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 HM13Q8TCT9 377 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 CHPT1Q8WUD6 406 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 DCUN1D1Q96GG9 259 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 SLC2A11Q9BYW1 496 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 FRMD8P1Q9BZ68 369 aaPredicted RBP8.76□□□□□ -1.01
SKA2-201ENST00000330137 DHX33Q9H6R0 707 aaKnown RBP8.76□□□□□ -1.01
SKA2-201ENST00000330137 PRDM16Q9HAZ2 1276 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 COQ6Q9Y2Z9 468 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 SF3B1O75533 1304 aaKnown RBP eCLIP8.75□□□□□ -1.017e-6■■■■■ 33.4
SKA2-201ENST00000330137 NPHP3-ACAD11A0A0J9YXS1 232 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 TGFB1I1O43294 461 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 USP1O94782 785 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 PDGFRBP09619 1106 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 TSPY3P0CV98 308 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 TSPY8P0CW00 308 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 SRGAP2CP0DJJ0 459 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 SRGAP2BP0DMP2 458 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 PCSK6P29122 969 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 CASP5P51878 434 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 TGFBIQ15582 683 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 PRPF39Q86UA1 669 aaKnown RBP8.75□□□□□ -1.01
SKA2-201ENST00000330137 PALB2Q86YC2 1186 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 FAM71AQ8IYT1 594 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 ZNF444Q8N0Y2 327 aaPredicted RBP8.75□□□□□ -1.01
SKA2-201ENST00000330137 LZTR1Q8N653 840 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 DDHD1Q8NEL9 900 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 HELBQ8NG08 1087 aaPredicted RBP8.75□□□□□ -1.01
SKA2-201ENST00000330137 EXD1Q8NHP7 514 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 ZNF420Q8TAQ5 688 aaPredicted RBP8.75□□□□□ -1.01
SKA2-201ENST00000330137 SLC26A7Q8TE54 656 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 ADAMTS16Q8TE57 1224 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 ZMAT2Q96NC0 199 aaKnown RBP8.75□□□□□ -1.01
SKA2-201ENST00000330137 HGH1Q9BTY7 390 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 TDRD1Q9BXT4 1180 aaKnown RBP8.75□□□□□ -1.01
SKA2-201ENST00000330137 GRIP2Q9C0E4 1043 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 VPS37BQ9H9H4 285 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 NOCTQ9UK39 431 aaKnown RBP8.75□□□□□ -1.01
SKA2-201ENST00000330137 PTBP2Q9UKA9 531 aaKnown RBP8.75□□□□□ -1.01
SKA2-201ENST00000330137 IQCA1LA6NCM1 817 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 SDR42E2A6NKP2 422 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 E7ESA3 106 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 BOLA2-SMG1P6H3BVE0 249 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 TXNDC9O14530 226 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 MARCH6O60337 910 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 BMP10O95393 424 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 PTPN7P35236 360 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 CASP4P49662 377 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 MYBPC1Q00872 1141 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 PDIA2Q13087 525 aaKnown RBP8.75□□□□□ -1.01
SKA2-201ENST00000330137 LPCAT4Q643R3 524 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 KRT39Q6A163 491 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 SH2D5Q6ZV89 423 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 ARCQ7LC44 396 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 EPS8L1Q8TE68 723 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 DLG3Q92796 817 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 CMTM5Q96DZ9 223 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 DHRS1Q96LJ7 313 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 CAMKK2Q96RR4 588 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 PPARGC1AQ9UBK2 798 aaKnown RBP8.75□□□□□ -1.01
SKA2-201ENST00000330137 VPS28Q9UK41 221 aa8.75□□□□□ -1.01
SKA2-201ENST00000330137 SHANK3Q9BYB0 1731 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 MYH11P35749 1972 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 TRIM64CA6NLI5 447 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 MAGEB3O15480 346 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 CRTAMO95727 393 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 MT-ND3P03897 115 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 RPS3AP61247 264 aaKnown RBP8.74□□□□□ -1.01
SKA2-201ENST00000330137 NAA20P61599 178 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 TXNL4AP83876 142 aaKnown RBP8.74□□□□□ -1.01
SKA2-201ENST00000330137 ZNF200P98182 395 aaPredicted RBP8.74□□□□□ -1.01
SKA2-201ENST00000330137 NCOA4Q13772 614 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 KCTD19Q17RG1 926 aaPredicted RBP8.74□□□□□ -1.01
SKA2-201ENST00000330137 ASPRV1Q53RT3 343 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 RNASEH2BQ5TBB1 312 aaKnown RBP8.74□□□□□ -1.01
SKA2-201ENST00000330137 IL23RQ5VWK5 629 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 ACAD10Q6JQN1 1059 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 DCDC5Q6ZRR9 648 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 FRA10AC1Q70Z53 315 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 TTC7BQ86TV6 843 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 CRLF3Q8IUI8 442 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 FBXW8Q8N3Y1 598 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 MINDY2Q8NBR6 621 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 GSTCDQ8NEC7 633 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 DCAKDQ8WVC6 231 aa8.74□□□□□ -1.01
SKA2-201ENST00000330137 PRR11Q96HE9 360 aaPredicted RBP8.74□□□□□ -1.01
SKA2-201ENST00000330137 REEP2Q9BRK0 252 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms