RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 MSS51Q4VC12 460 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 KCNT1Q5JUK3 1230 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 GADL1Q6ZQY3 521 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 C3orf62Q6ZUJ4 267 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 RHPN2Q8IUC4 686 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 DNERQ8NFT8 737 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 RSAD2Q8WXG1 361 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 FRMD8P1Q9BZ68 369 aaPredicted RBP16.12■□□□□ 0.17
BRCC3-201ENST00000330045 BTBD7Q9P203 1132 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 PTPRFP10586 1907 aa16.12■□□□□ 0.17
BRCC3-201ENST00000330045 SIGLEC16A6NMB1 481 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 LRCH4O75427 683 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 MAFO75444 373 aaPredicted RBP16.11■□□□□ 0.17
BRCC3-201ENST00000330045 WFS1O76024 890 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 IL1R2P27930 398 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 STAT5BP51692 787 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 TFAMQ00059 246 aaKnown RBP16.11■□□□□ 0.17
BRCC3-201ENST00000330045 EFTUD2Q15029 972 aaKnown RBP eCLIP16.11■□□□□ 0.172e-6■■■■■ 53.4
BRCC3-201ENST00000330045 ZNF699Q32M78 642 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 PTPN20Q4JDL3 420 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 ZC3H12AQ5D1E8 599 aaKnown RBP16.11■□□□□ 0.17
BRCC3-201ENST00000330045 DENND1BQ6P3S1 775 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 ADGRD1Q6QNK2 874 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 BBS12Q6ZW61 710 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 OTOAQ7RTW8 1153 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 AGGF1Q8N302 714 aaeCLIP16.11■□□□□ 0.17
BRCC3-201ENST00000330045 ARFGAP1Q8N6T3 406 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 JOSD2Q8TAC2 188 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 TMEM237Q96Q45 408 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 HOXC10Q9NYD6 342 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 ZMYND8Q9ULU4 1186 aaPredicted RBP16.11■□□□□ 0.17
BRCC3-201ENST00000330045 CSADQ9Y600 493 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 PAPPA2Q9BXP8 1791 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 FGFR1P11362 822 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 ATP2A2P16615 1042 aaKnown RBP16.11■□□□□ 0.17
BRCC3-201ENST00000330045 KDELR1P24390 212 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 RPL22P35268 128 aaKnown RBP16.11■□□□□ 0.17
BRCC3-201ENST00000330045 SURF1Q15526 300 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 SEPT7Q16181 437 aaKnown RBP16.11■□□□□ 0.17
BRCC3-201ENST00000330045 DHX37Q8IY37 1157 aaKnown RBP16.11■□□□□ 0.17
BRCC3-201ENST00000330045 INPP5DQ92835 1189 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 PAFAH2Q99487 392 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 ACO2Q99798 780 aaKnown RBP16.11■□□□□ 0.17
BRCC3-201ENST00000330045 ACSS3Q9H6R3 686 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 CYLDQ9NQC7 956 aa16.11■□□□□ 0.17
BRCC3-201ENST00000330045 UBA1P22314 1058 aaKnown RBP16.1■□□□□ 0.17
BRCC3-201ENST00000330045 ASPAP45381 313 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 SLC8A3P57103 927 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 YWHAEP62258 255 aaKnown RBP16.1■□□□□ 0.17
BRCC3-201ENST00000330045 KLHL38Q2WGJ6 581 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 DPY19L2Q6NUT2 758 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 PALM2Q8IXS6 379 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 THNSL1Q8IYQ7 743 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 FBXO36Q8NEA4 188 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 TJP2Q9UDY2 1190 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 CPSF3Q9UKF6 684 aaKnown RBP16.1■□□□□ 0.17
BRCC3-201ENST00000330045 E7ESA3 106 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 PIAS1O75925 651 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 FARP2O94887 1054 aaPredicted RBP16.1■□□□□ 0.17
BRCC3-201ENST00000330045 SRGAP2CP0DJJ0 459 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 CD19P15391 556 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 CRYMQ14894 314 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 SH3D19Q5HYK7 790 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 FAM160B1Q5W0V3 765 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 KIAA0319LQ8IZA0 1049 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 TAB3Q8N5C8 712 aaPredicted RBP16.1■□□□□ 0.17
BRCC3-201ENST00000330045 FNIP1Q8TF40 1166 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 MIEF2Q96C03 454 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 DHRS4Q9BTZ2 278 aa16.1■□□□□ 0.17
BRCC3-201ENST00000330045 PRKCBP05771 671 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 T-ENOLP0DO92 83 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 ADRA1DP25100 572 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 RASSF2P50749 326 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 PSMC1P62191 440 aaKnown RBP16.09■□□□□ 0.17
BRCC3-201ENST00000330045 TAZQ16635 292 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 MAPK6Q16659 721 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 FYB2Q5VWT5 728 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 ZNF449Q6P9G9 518 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 UNC45BQ8IWX7 931 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 MAB21L3Q8N8X9 362 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 SLC7A6OSQ96CW6 309 aaPredicted RBP16.09■□□□□ 0.17
BRCC3-201ENST00000330045 WDR83Q9BRX9 315 aaKnown RBP16.09■□□□□ 0.17
BRCC3-201ENST00000330045 XYLT2Q9H1B5 865 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 LHX5Q9H2C1 402 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 NXF1Q9UBU9 619 aaKnown RBP16.09■□□□□ 0.17
BRCC3-201ENST00000330045 CYTH4Q9UIA0 394 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 TCRBV7S3A2A0A539 114 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 MED7O43513 233 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 CD48P09326 243 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 HOXC6P09630 235 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 NAA25Q14CX7 972 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 BBS9Q3SYG4 887 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 SLC45A4Q5BKX6 768 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 IER5Q5VY09 327 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 PDIK1LQ8N165 341 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 KCTD6Q8NC69 237 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 TCP10LQ8TDR4 215 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 MZB1Q8WU39 189 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 NPHS2Q9NP85 383 aa16.09■□□□□ 0.17
BRCC3-201ENST00000330045 WDR91A4D1P6 747 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms