RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ITIH5Q86UX2 942 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 ICA1LQ8NDH6 482 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 LILRB4Q8NHJ6 448 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 HPS1Q92902 700 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 UIMC1Q96RL1 719 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 DCUN1D5Q9BTE7 237 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 RPAP3Q9H6T3 665 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-201ENST00000328923 ARMCX1Q9P291 453 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 PCDHGA11Q9Y5H2 935 aa12.39□□□□□ -0.43
SHMT2-201ENST00000328923 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 TTLL1O95922 423 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 HSPA1AP0DMV8 641 aaKnown RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 HSPA1BP0DMV9 641 aaKnown RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 NR4A1P22736 598 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 KLRK1P26718 216 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 ADSLP30566 484 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 FDFT1P37268 417 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 NUP107P57740 925 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 PTK2Q05397 1052 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 ZBTB16Q05516 673 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 EIF2B5Q13144 721 aaKnown RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 SNAPC2Q13487 334 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 ZYXQ15942 572 aaKnown RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 EDRF1Q3B7T1 1238 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 GRAMD1BQ3KR37 738 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 SBK1Q52WX2 424 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 TRMT10CQ7L0Y3 403 aaKnown RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 NEK8Q86SG6 692 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 CPSF7Q8N684 471 aaKnown RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 RAD54LQ92698 747 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 MTBPQ96DY7 904 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 CNBD2Q96M20 576 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 PCDHA3Q9Y5H8 950 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 KRBA1A5PL33 1030 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 C2orf71A6NGG8 1288 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 USP17L12C9JPN9 530 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 USP17L21D6R901 530 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 TMX2-CTNND1H3BSU7 103 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 NMT2O60551 498 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 ZBTB7AO95365 584 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 ABCB1P08183 1280 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 CLK3P49761 638 aaKnown RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 RALGDSQ12967 914 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 MTMR2Q13614 643 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 SPARCL1Q14515 664 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 AADACL2Q6P093 401 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 ALKBH5Q6P6C2 394 aaKnown RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 ZNF571Q7Z3V5 609 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 FBXO33Q7Z6M2 555 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 ADGRG6Q86SQ4 1221 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 TTC30BQ8N4P2 665 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 NATD1Q8N6N6 113 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 RBM15BQ8NDT2 890 aaKnown RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 GSTCDQ8NEC7 633 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 RAB3IL1Q8TBN0 382 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 CALML6Q8TD86 181 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 MED30Q96HR3 178 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 PNMA5Q96PV4 448 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 RNF38Q9H0F5 515 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 ZNF696Q9H7X3 374 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 AAASQ9NRG9 546 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 DDX56Q9NY93 547 aaKnown RBP12.38□□□□□ -0.43
SHMT2-201ENST00000328923 PARP2Q9UGN5 583 aa12.38□□□□□ -0.43
SHMT2-201ENST00000328923 MAST2Q6P0Q8 1798 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 GOLGA8CPA6NN73 597 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 CCNT1O60563 726 aaKnown RBP12.37□□□□□ -0.43
SHMT2-201ENST00000328923 ICMTO60725 284 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 FKBP6O75344 327 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 SULT1C4O75897 302 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 TNFAIP8O95379 198 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 CRYZL1O95825 349 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 GYS1P13807 737 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 HMGB2P26583 209 aaKnown RBP12.37□□□□□ -0.43
SHMT2-201ENST00000328923 TECP42680 631 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 SCNN1DP51172 638 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 XIAPP98170 497 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 IFITM2Q01629 132 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 TMED2Q15363 201 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 MAPK6Q16659 721 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 ZNF829Q3KNS6 432 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-201ENST00000328923 CCDC58Q4VC31 144 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 TTC27Q6P3X3 843 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 TTC23LQ6PF05 361 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.37□□□□□ -0.43
SHMT2-201ENST00000328923 ELMOD1Q8N336 334 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 PCYOX1LQ8NBM8 494 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 HCAR2Q8TDS4 363 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 DDI1Q8WTU0 396 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 ART4Q93070 314 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 FAR2Q96K12 515 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 CSRNP1Q96S65 589 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 OSBPL8Q9BZF1 889 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 KLHL25Q9H0H3 589 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 FKBP14Q9NWM8 211 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 DCAF8L1A6NGE4 600 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 TRAF5O00463 557 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 DNAJA2O60884 412 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 TM7SF2O76062 418 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 H2AFZP0C0S5 128 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms