RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 I3L4J1 428 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 COPEO14579 308 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 KCNN4O15554 427 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 B4GALT5O43286 388 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 PYGBP11216 843 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 CDKN2BP42772 138 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 TGFB2P61812 414 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 ZNF252P-AS1Q0IIN9 211 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 RNASEH2BQ5TBB1 312 aaKnown RBP13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 FAM160B1Q5W0V3 765 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 RPF1Q9H9Y2 349 aaKnown RBP13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 ARHGEF3Q9NR81 526 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 RNF19AQ9NV58 838 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 PPARGC1AQ9UBK2 798 aaKnown RBP13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 NKX1-2Q9UD57 310 aaPredicted RBP13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 E2F8A0AVK6 867 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 KBTBD13C9JR72 458 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 PRPSAP2O60256 369 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 TOM1L1O75674 476 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 ASS1P00966 412 aaKnown RBP13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 OAS1P00973 400 aaKnown RBP13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 IL1R2P27930 398 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 ROR1Q01973 937 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 MCL1Q07820 350 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 KBTBD12Q3ZCT8 623 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 FKBP1CQ5VVH2 108 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 C7orf31Q8N865 590 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 CYTH2Q99418 400 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 FOXP3Q9BZS1 431 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 MIS12Q9H081 205 aa13.5□□□□□ -0.25
HMGCS1-201ENST00000325110 ADCY3O60266 1144 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 FAM155BO75949 473 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 ZBTB7AO95365 584 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 ZBED1O96006 694 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 ITGB3P05106 788 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 ATP4AP20648 1035 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 SERPINB3P29508 390 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 FAAP100Q0VG06 881 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 TTLL12Q14166 644 aaPredicted RBP13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 C15orf59Q2T9L4 293 aaPredicted RBP13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 TSNAXIP1Q2TAA8 658 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 DLK2Q6UY11 383 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 C15orf39Q6ZRI6 1047 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 BRSK2Q8IWQ3 736 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 LMNTD2Q8IXW0 634 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 AGGF1Q8N302 714 aaeCLIP13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 FAM13CQ8NE31 585 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 CPT1BQ92523 772 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 OSBPL1AQ9BXW6 950 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 PIH1D1Q9NWS0 290 aaKnown RBP13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 STRIP2Q9ULQ0 834 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 STARD13Q9Y3M8 1113 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 FOCADQ5VW36 1801 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 IQANK1A0A1B0GTG1 560 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 ALOX15BO15296 676 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 LRCH4O75427 683 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 TMEM63AO94886 807 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 BAG2O95816 211 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 PGK2P07205 417 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 PDGFRAP16234 1089 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 UBA1P22314 1058 aaKnown RBP13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 MIPP30301 263 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 KDSRQ06136 332 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 MAP3K20Q9NYL2 800 aaKnown RBP13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 ZNF214Q9UL59 606 aaPredicted RBP13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 ZNF831Q5JPB2 1677 aa13.49□□□□□ -0.25
HMGCS1-201ENST00000325110 TRIM49D1C9J1S8 452 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 OGTO15294 1046 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 GPX6P59796 221 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 RIPK1Q13546 671 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 GALNTL6Q49A17 601 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 PCGF5Q86SE9 256 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 TTC13Q8NBP0 860 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 CPXM1Q96SM3 734 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 ZMYND8Q9ULU4 1186 aaPredicted RBP13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 SIPA1L1O43166 1804 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 ENO4A6NNW6 628 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 ENO1P06733 434 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 ABHD2P08910 425 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 PTPRAP18433 802 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 YWHAEP62258 255 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 ZNF200P98182 395 aaPredicted RBP13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 SH3PXD2AQ5TCZ1 1133 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 EEF1DP3Q658K8 133 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 CAPRIN2Q6IMN6 1127 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 XRRA1Q6P2D8 792 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 ARMC2Q8NEN0 867 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 CFAP61Q8NHU2 1237 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 ZNF570Q96NI8 536 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 MECRQ9BV79 373 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 SMYD3Q9H7B4 428 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 ACTL7BQ9Y614 415 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 LTBP4Q8N2S1 1624 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 MED7O43513 233 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 ATP5HO75947 161 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 KDELR1P24390 212 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 PTP4A2Q12974 167 aa13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 BZW1Q7L1Q6 419 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-201ENST00000325110 NETO2Q8NC67 525 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms