RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 YWHAGP61981 247 aaKnown RBP eCLIP20.81■□□□□ 0.92
CRLF3-201ENST00000324238 FAAP100Q0VG06 881 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 CAPSQ13938 189 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 TMEM35BQ8NCS4 154 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 GPRASP2Q96D09 838 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 VCPIP1Q96JH7 1222 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 CAMKK2Q96RR4 588 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 OSBPL1AQ9BXW6 950 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 CADM1Q9BY67 442 aaKnown RBP20.81■□□□□ 0.92
CRLF3-201ENST00000324238 SYNCQ9H7C4 482 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 PIM2Q9P1W9 311 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 F5H423 210 aaPredicted RBP20.81■□□□□ 0.92
CRLF3-201ENST00000324238 KIF1CO43896 1103 aaKnown RBP20.81■□□□□ 0.92
CRLF3-201ENST00000324238 STAM2O75886 525 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 SUPT20HL2P0C7V6 817 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 PYGBP11216 843 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 KRT3P12035 628 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 PSEN1P49768 467 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 SUPT20HL1Q3ZLR7 823 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 AGGF1Q8N302 714 aaeCLIP20.81■□□□□ 0.92
CRLF3-201ENST00000324238 SLC35B2Q8TB61 432 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 CFAP36Q96G28 342 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 MANSC1Q9H8J5 431 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 PCDH9Q9HC56 1237 aa20.81■□□□□ 0.92
CRLF3-201ENST00000324238 MARCOQ9UEW3 520 aaPredicted RBP20.81■□□□□ 0.92
CRLF3-201ENST00000324238 KIAA1217Q5T5P2 1943 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 LOXHD1Q8IVV2 1947 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 C3orf70A6NLC5 250 aaPredicted RBP20.8■□□□□ 0.92
CRLF3-201ENST00000324238 MAP3K13O43283 966 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 KITP10721 976 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 SKIV2L2P42285 1042 aaKnown RBP20.8■□□□□ 0.92
CRLF3-201ENST00000324238 ARL4CP56559 192 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 MCCD1P59942 119 aaPredicted RBP20.8■□□□□ 0.92
CRLF3-201ENST00000324238 PSMC1P62191 440 aaKnown RBP20.8■□□□□ 0.92
CRLF3-201ENST00000324238 MAP3K10Q02779 954 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 CDO1Q16878 200 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 KBTBD12Q3ZCT8 623 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 EFHC2Q5JST6 749 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 PRPF39Q86UA1 669 aaKnown RBP20.8■□□□□ 0.92
CRLF3-201ENST00000324238 CTAGE3PQ8IX95 158 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 ZNF276Q8N554 614 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 PRPF31Q8WWY3 499 aaKnown RBP20.8■□□□□ 0.92
CRLF3-201ENST00000324238 PORCNQ9H237 461 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 FARP1Q9Y4F1 1045 aaPredicted RBP20.8■□□□□ 0.92
CRLF3-201ENST00000324238 TCRBV5S1A1TA0A578 114 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 E5RJQ4 531 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 WDR78Q5VTH9 848 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 FYB2Q5VWT5 728 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 TDRPQ86YL5 185 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 TEX2Q8IWB9 1127 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 SCYL3Q8IZE3 742 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 KCTD6Q8NC69 237 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 HMGXB4Q9UGU5 601 aa20.8■□□□□ 0.92
CRLF3-201ENST00000324238 FAM237BA0A1B0GVD1 139 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 KRT36O76013 467 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 ASS1P00966 412 aaKnown RBP20.79■□□□□ 0.92
CRLF3-201ENST00000324238 TBXAS1P24557 533 aaPredicted RBP20.79■□□□□ 0.92
CRLF3-201ENST00000324238 TRPC3Q13507 836 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 LY6KQ17RY6 165 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 ZNF772Q68DY9 489 aaPredicted RBP20.79■□□□□ 0.92
CRLF3-201ENST00000324238 C1orf228Q6PIY5 440 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 TMEM192Q8IY95 271 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 MTMR14Q8NCE2 650 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 DCAKDQ8WVC6 231 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 CPXM1Q96SM3 734 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 ASCC2Q9H1I8 757 aaPredicted RBP20.79■□□□□ 0.92
CRLF3-201ENST00000324238 CYLDQ9NQC7 956 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 SHOC2Q9UQ13 582 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 LPXNO60711 386 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 SMNDC1O75940 238 aaKnown RBP eCLIP20.79■□□□□ 0.92
CRLF3-201ENST00000324238 MT-ND3P03897 115 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 OATP04181 439 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 CALB1P05937 261 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 ITGAVP06756 1048 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 IRX4P78413 519 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 KPNB1Q14974 876 aaKnown RBP20.79■□□□□ 0.92
CRLF3-201ENST00000324238 CDHR3Q6ZTQ4 885 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 PPIL6Q8IXY8 311 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 ATP11CQ8NB49 1132 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 NKD2Q969F2 451 aaPredicted RBP20.79■□□□□ 0.92
CRLF3-201ENST00000324238 TEX13BQ9BXU2 312 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 DRG1Q9Y295 367 aaKnown RBP20.79■□□□□ 0.92
CRLF3-201ENST00000324238 SNCAIPQ9Y6H5 919 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 NFKBIEO00221 500 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 TOP3BO95985 862 aaKnown RBP20.79■□□□□ 0.92
CRLF3-201ENST00000324238 EIF3EP60228 445 aaKnown RBP20.79■□□□□ 0.92
CRLF3-201ENST00000324238 CTC1Q2NKJ3 1217 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 PARP6Q2NL67 630 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 GNPTABQ3T906 1256 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 ANO7Q6IWH7 933 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 ALYREFQ86V81 257 aaKnown RBP20.79■□□□□ 0.92
CRLF3-201ENST00000324238 NAT8LQ8N9F0 302 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 FBXO27Q8NI29 283 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 ACAD9Q9H845 621 aa20.79■□□□□ 0.92
CRLF3-201ENST00000324238 ZNF646O15015 1829 aaPredicted RBP20.79■□□□□ 0.92
CRLF3-201ENST00000324238 KBTBD13C9JR72 458 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 UGT1A9O60656 530 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 RBP3P10745 1247 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 HMGB2P26583 209 aaKnown RBP20.78■□□□□ 0.92
CRLF3-201ENST00000324238 ZNF132P52740 706 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms