RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 LBHD1Q9BQE6 289 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 ZC3H7BQ9UGR2 993 aaKnown RBP10.08□□□□□ -0.8
COL12A1-201ENST00000322507 ENOPH1Q9UHY7 261 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 ABCG2Q9UNQ0 655 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 PCDHB6Q9Y5E3 794 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 CASZ1Q86V15 1759 aa10.08□□□□□ -0.8
COL12A1-201ENST00000322507 ABATP80404 500 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 SLC27A3Q5K4L6 730 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 ESRP1Q6NXG1 681 aaKnown RBP10.07□□□□□ -0.8
COL12A1-201ENST00000322507 C1orf94Q6P1W5 598 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 RFX8Q6ZV50 586 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 NAT9Q9BTE0 207 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 AP1M1Q9BXS5 423 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 C17orf75Q9HAS0 396 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 ZNF302Q9NR11 478 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 CLIC2O15247 247 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 IFNA14P01570 189 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 FDPSP14324 419 aaKnown RBP10.07□□□□□ -0.8
COL12A1-201ENST00000322507 BICRALQ6AI39 1079 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 GPD1LQ8N335 351 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 SCFD2Q8WU76 684 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 CHCHD6Q9BRQ6 235 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 TJP2Q9UDY2 1190 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 PSMD14O00487 310 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 CD58P19256 250 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 KLHL1Q9NR64 748 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 PSMC3IPQ9P2W1 217 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-201ENST00000322507 USP17L8P0C7I0 530 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 COASYQ13057 564 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 TRPM8Q7Z2W7 1104 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 C3orf70A6NLC5 250 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-201ENST00000322507 LRRC53A6NM62 1247 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 SRRM3A6NNA2 597 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-201ENST00000322507 RGS4P49798 205 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 SLC25A24Q6NUK1 477 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 COA7Q96BR5 231 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 ZFP42Q96MM3 310 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 KLHL32Q96NJ5 620 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 NUDT12Q9BQG2 462 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 UBE2QL1A1L167 161 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 NEK5Q6P3R8 708 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 USP17L2Q6R6M4 530 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 CCNJLQ8IV13 435 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 DCLRE1BQ9H816 532 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 USP15Q9Y4E8 981 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-201ENST00000322507 RGS10O43665 173 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 USP1O94782 785 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 EMC2Q15006 297 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 CLEC4FQ8N1N0 589 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 APOL6Q9BWW8 343 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 TUBAL3A6NHL2 446 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 MAGEB2O15479 319 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 SLC40A1Q9NP59 571 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 A0A1W2PQ72 361 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 DENND3A2RUS2 1198 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 DGAT1O75907 488 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 PARNO95453 639 aaKnown RBP10.07□□□□□ -0.8
COL12A1-201ENST00000322507 UBTFL6P0CB48 400 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-201ENST00000322507 TIMM50Q3ZCQ8 353 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 UHMK1Q8TAS1 419 aaKnown RBP10.07□□□□□ -0.8
COL12A1-201ENST00000322507 RBM46Q8TBY0 533 aaKnown RBP10.07□□□□□ -0.8
COL12A1-201ENST00000322507 DYRK4Q9NR20 520 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 STOMP27105 288 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 PTPN6P29350 595 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 ITIH4Q14624 930 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 SLC18A3Q16572 532 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 LCORLQ8N3X6 602 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 SVOPQ8N4V2 548 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 ATP6V1C2Q8NEY4 427 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 TCEAL3Q969E4 200 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 ZNF341Q9BYN7 854 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 PRRG3Q9BZD7 231 aa10.07□□□□□ -0.8
COL12A1-201ENST00000322507 FAM47DPA6NHR8 397 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 MATN2O00339 956 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 ZNF862O60290 1169 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 CEBPGP53567 150 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 PEX3P56589 373 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 LRRC74AQ0VAA2 488 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 SENP7Q9BQF6 1050 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 FNTAP49354 379 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 NDUFAF6Q330K2 333 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 UGT3A1Q6NUS8 523 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 LRRC17Q8N6Y2 441 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 UQCC2Q9BRT2 126 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 CITO14578 2027 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 CLRN2A0PK11 232 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 PHF2O75151 1096 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 PKP1Q13835 747 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 TNFAIP8L3Q5GJ75 292 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 CCSAPQ6IQ19 270 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 JPH1Q9HDC5 661 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 HDAC6Q9UBN7 1215 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 TKFCQ3LXA3 575 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 FASTKD1Q53R41 847 aaKnown RBP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 ARHGEF26Q96DR7 871 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 ZNF512BQ96KM6 892 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 APOL2Q9BQE5 337 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 LRRC7Q96NW7 1537 aa10.06□□□□□ -0.8
COL12A1-201ENST00000322507 ATP5BP06576 529 aaKnown RBP10.06□□□□□ -0.8
COL12A1-201ENST00000322507 BST2Q10589 180 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms