RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 MAPK7Q13164 816 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 SNX17Q15036 470 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 PRMT9Q6P2P2 845 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 FAM71DQ8N9W8 422 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 ENKURQ8TC29 256 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 FAM111AQ96PZ2 611 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 CELF4Q9BZC1 486 aaKnown RBP17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 GYPCP04921 128 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 DDX53Q86TM3 631 aaKnown RBP17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 COPG2Q9UBF2 871 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 STON1Q9Y6Q2 735 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 USP17L10C9JJH3 530 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 SASH1O94885 1247 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 COMTP21964 271 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 TPP2P29144 1249 aaPredicted RBP17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 IZUMO2Q6UXV1 221 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 MDM1Q8TC05 714 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 UBE2OQ9C0C9 1292 aaKnown RBP17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 TMEM260Q9NX78 707 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 UBA2Q9UBT2 640 aaPredicted RBP17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 HEATR9A2RTY3 570 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 RHOBTB3O94955 611 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 PWP1Q13610 501 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 BDH2Q9BUT1 245 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 STK39Q9UEW8 545 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 ATP6V1B2P21281 511 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 KRT73Q86Y46 540 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 LRCH1Q9Y2L9 728 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 F8W810 466 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 COILP38432 576 aaPredicted RBP17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 C16orf72Q14CZ0 275 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 TFDP3Q5H9I0 405 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 SEPT1Q8WYJ6 367 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 MIEF2Q96C03 454 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 NARS2Q96I59 477 aaKnown RBP17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 DAPK2Q9UIK4 370 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 PCDHB2Q9Y5E7 798 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 TIMM44O43615 452 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 GLRA3O75311 464 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 R3HDM1Q15032 1099 aaKnown RBP17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 SMTNL2Q2TAL5 461 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 AHI1Q8N157 1196 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 ATP1A4Q13733 1029 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 FUT11Q495W5 492 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 ANKS1AQ92625 1134 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 PIDD1Q9HB75 910 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 IFNA14P01570 189 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 RASA2Q15283 850 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 USP13Q92995 863 aaPredicted RBP17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 LSM7Q9UK45 103 aaKnown RBP17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 VWA5AO00534 786 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 PTPN7P35236 360 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 PTGER2P43116 358 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 HS6ST3Q8IZP7 471 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 CYP4Z2PQ8N1L4 340 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 TMEM8AQ9HCN3 771 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 TRIM49D1C9J1S8 452 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 WDR48Q8TAF3 677 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 KCTD14Q9BQ13 255 aaPredicted RBP17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 WWOXQ9NZC7 414 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 ASAP1Q9ULH1 1129 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 TMEM2Q9UHN6 1383 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 BAG6P46379 1132 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 RXRGP48443 463 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 C16orf62Q7Z3J2 963 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 C11orf74Q86VG3 221 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 RTKN2Q8IZC4 609 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 TPCN2Q8NHX9 752 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 AVENQ9NQS1 362 aaPredicted RBP17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 MROH7-TTC4A0A0A0MT08 1334 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 MICAL3Q7RTP6 2002 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 IPMKQ8NFU5 416 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 PALLDQ8WX93 1383 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 KIF28PB7ZC32 967 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 GUCY1A2P33402 732 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 TRAF2Q12933 501 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 NFIL3Q16649 462 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 ZFP1Q6P2D0 407 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 HOMEZQ8IX15 550 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 STKLD1Q8NE28 680 aa17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 REXO4Q9GZR2 422 aaKnown RBP17.48■□□□□ 0.39
SMCHD1-201ENST00000320876 SF3B1O75533 1304 aaKnown RBP eCLIP17.48■□□□□ 0.392e-6■■■■■ 84.5
SMCHD1-201ENST00000320876 ATP6V1G2O95670 118 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 NAIF1Q69YI7 327 aaPredicted RBP17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 SVOPQ8N4V2 548 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 NPHP3-ACAD11A0A0J9YXS1 232 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 SLC7A14Q8TBB6 771 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 MCRS1Q96EZ8 462 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 FHOD1Q9Y613 1164 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 LRRC7Q96NW7 1537 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 ANXA9O76027 345 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 RPS7P62081 194 aaKnown RBP17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 PHKG1Q16816 387 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 CHSY1Q86X52 802 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 TSEN34Q9BSV6 310 aaKnown RBP17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 TRMT6Q9UJA5 497 aaKnown RBP17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 SLCO1B7G3V0H7 640 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 TFE3P19532 575 aaPredicted RBP17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 CSE1LP55060 971 aaKnown RBP17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 ADSSL1Q8N142 457 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms