RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ACTL7BQ9Y614 415 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 RGPD3A6NKT7 1758 aaPredicted RBP18.27■□□□□ 0.52
COL9A1-201ENST00000320755 RGPD4Q7Z3J3 1758 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 POLR2AP24928 1970 aaKnown RBP18.27■□□□□ 0.52
COL9A1-201ENST00000320755 CLUHO75153 1309 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 GPR25O00155 361 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 ACKR2O00590 384 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 KRT7P08729 469 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 EZRP15311 586 aaKnown RBP18.27■□□□□ 0.52
COL9A1-201ENST00000320755 EIF3EP60228 445 aaKnown RBP18.27■□□□□ 0.52
COL9A1-201ENST00000320755 MKRN3Q13064 507 aaKnown RBP18.27■□□□□ 0.52
COL9A1-201ENST00000320755 FAM102AQ5T9C2 384 aaPredicted RBP18.27■□□□□ 0.52
COL9A1-201ENST00000320755 LVRNQ6Q4G3 990 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 RIBC1Q8N443 379 aaPredicted RBP18.27■□□□□ 0.52
COL9A1-201ENST00000320755 C1orf127Q8N9H9 656 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 FBF1Q8TES7 1133 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 ERP27Q96DN0 273 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 CPB2Q96IY4 423 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 CDT1Q9H211 546 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 ETNK1Q9HBU6 452 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 PDGFCQ9NRA1 345 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 SHOC2Q9UQ13 582 aa18.27■□□□□ 0.52
COL9A1-201ENST00000320755 LCTP09848 1927 aa18.27■□□□□ 0.51
COL9A1-201ENST00000320755 CFAP73A6NFT4 308 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 LACTBL1A8MY62 500 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 RNF8O76064 485 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 ARL4CP56559 192 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 ASCC2Q9H1I8 757 aaPredicted RBP18.26■□□□□ 0.51
COL9A1-201ENST00000320755 GPRC5DQ9NZD1 345 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 PSMC3IPQ9P2W1 217 aaPredicted RBP18.26■□□□□ 0.51
COL9A1-201ENST00000320755 CHMP2BQ9UQN3 213 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 CSADQ9Y600 493 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 EVPLQ92817 2033 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 TGFB3P10600 412 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 RBP3P10745 1247 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 SURF1Q15526 300 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 ACCSLQ4AC99 568 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 CDCA2Q69YH5 1023 aaPredicted RBP18.26■□□□□ 0.51
COL9A1-201ENST00000320755 JADE1Q6IE81 842 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 MOB2Q70IA6 237 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 XYLT1Q86Y38 959 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 PPIL6Q8IXY8 311 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 GBP7Q8N8V2 638 aaPredicted RBP18.26■□□□□ 0.51
COL9A1-201ENST00000320755 SPATA18Q8TC71 538 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 XPO7Q9UIA9 1087 aaKnown RBP18.26■□□□□ 0.51
COL9A1-201ENST00000320755 MED7O43513 233 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 EDNRBP24530 442 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 GBP2P32456 591 aaPredicted RBP18.26■□□□□ 0.51
COL9A1-201ENST00000320755 NR1H3Q13133 447 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 PREPLQ4J6C6 727 aaPredicted RBP18.26■□□□□ 0.51
COL9A1-201ENST00000320755 TSHZ1Q6ZSZ6 1077 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 STAMBPL1Q96FJ0 436 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 TMEM237Q96Q45 408 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 ELOVL4Q9GZR5 314 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 MYLK2Q9H1R3 596 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 RNPEPQ9H4A4 650 aa18.26■□□□□ 0.51
COL9A1-201ENST00000320755 TMEM63AO94886 807 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 GCLCP48506 637 aaPredicted RBP18.25■□□□□ 0.51
COL9A1-201ENST00000320755 GEMIN4P57678 1058 aaKnown RBP18.25■□□□□ 0.51
COL9A1-201ENST00000320755 Q3C1V9 767 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 CELF3Q5SZQ8 465 aaKnown RBP18.25■□□□□ 0.51
COL9A1-201ENST00000320755 SCYL2Q6P3W7 929 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 ZNF449Q6P9G9 518 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 C1orf228Q6PIY5 440 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 ANKLE1Q8NAG6 615 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 SLC4A11Q8NBS3 891 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 DENND1AQ8TEH3 1009 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 CLMNQ96JQ2 1002 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 ADPGKQ9BRR6 497 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 TXNRD2Q9NNW7 524 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 RABGEF1Q9UJ41 708 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 MICAL2O94851 1124 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 STAG3L1P0CL83 205 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 TXNP10599 105 aaKnown RBP18.25■□□□□ 0.51
COL9A1-201ENST00000320755 ADRA1DP25100 572 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 TARSP26639 723 aaKnown RBP18.25■□□□□ 0.51
COL9A1-201ENST00000320755 SLC8A1P32418 973 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 CDH5P33151 784 aaPredicted RBP18.25■□□□□ 0.51
COL9A1-201ENST00000320755 ATP11AP98196 1134 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 PTPN11Q06124 597 aaPredicted RBP18.25■□□□□ 0.51
COL9A1-201ENST00000320755 OVGP1Q12889 678 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 C15orf59Q2T9L4 293 aaPredicted RBP18.25■□□□□ 0.51
COL9A1-201ENST00000320755 DARS2Q6PI48 645 aaKnown RBP18.25■□□□□ 0.51
COL9A1-201ENST00000320755 NIPA2Q8N8Q9 360 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 GIMAP7Q8NHV1 300 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 AGAP11Q8TF27 550 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 PAFAH2Q99487 392 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 C2orf40Q9H1Z8 148 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 USP18Q9UMW8 372 aa18.25■□□□□ 0.51
COL9A1-201ENST00000320755 ADM5C9JUS6 153 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 AVILO75366 819 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 FGFR1P11362 822 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 RGS7P49802 495 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 CDH6P55285 790 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 GRM1Q13255 1194 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 SETDB1Q15047 1291 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 SH3D19Q5HYK7 790 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 BBS12Q6ZW61 710 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 PLCD4Q9BRC7 762 aa18.24■□□□□ 0.51
COL9A1-201ENST00000320755 DCTN4Q9UJW0 460 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms