RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 CSNK1G1Q9HCP0 422 aa14.4□□□□□ -0.1
PRPF18-201ENST00000320054 ALG13Q9NP73 1137 aaKnown RBP14.4□□□□□ -0.1
PRPF18-201ENST00000320054 CYLDQ9NQC7 956 aa14.4□□□□□ -0.1
PRPF18-201ENST00000320054 TLR9Q9NR96 1032 aa14.4□□□□□ -0.1
PRPF18-201ENST00000320054 INTUQ9ULD6 942 aa14.4□□□□□ -0.1
PRPF18-201ENST00000320054 MAFFQ9ULX9 164 aa14.4□□□□□ -0.1
PRPF18-201ENST00000320054 REXO2Q9Y3B8 237 aaKnown RBP14.4□□□□□ -0.1
PRPF18-201ENST00000320054 PCDHB5Q9Y5E4 795 aa14.4□□□□□ -0.1
PRPF18-201ENST00000320054 RANBP2P49792 3224 aaKnown RBP14.39□□□□□ -0.11
PRPF18-201ENST00000320054 CLDN5O00501 218 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 C2CD2LO14523 706 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 XPO1O14980 1071 aaKnown RBP14.39□□□□□ -0.11
PRPF18-201ENST00000320054 GRM6O15303 877 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 CXCL14O95715 111 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 CCDC175P0C221 793 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 FAM200BP0CF97 657 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 DNAJB1P25685 340 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 OR1D2P34982 312 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 MAGEA1P43355 309 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 SLC8A3P57103 927 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 ERVFC1P60507 584 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 ROR1Q01973 937 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 PDE4CQ08493 712 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 SMC1AQ14683 1233 aaKnown RBP14.39□□□□□ -0.11
PRPF18-201ENST00000320054 VSTM1Q6UX27 236 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 TXLNBQ8N3L3 684 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 UBA3Q8TBC4 463 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 SLC35F5Q8WV83 523 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 SECISBP2LQ93073 1101 aaKnown RBP14.39□□□□□ -0.11
PRPF18-201ENST00000320054 TIFAQ96CG3 184 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 NOX5Q96PH1 765 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 TCF25Q9BQ70 676 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 NGRNQ9NPE2 291 aaKnown RBP14.39□□□□□ -0.11
PRPF18-201ENST00000320054 TAS2R14Q9NYV8 317 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 HSFX1Q9UBD0 423 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 MTUS1Q9ULD2 1270 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 PYCARDQ9ULZ3 195 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 ZKSCAN5Q9Y2L8 839 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 PCDHA13Q9Y5I0 950 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 MYO16Q9Y6X6 1858 aa14.39□□□□□ -0.11
PRPF18-201ENST00000320054 WDR27A2RRH5 827 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 MTMR11A4FU01 709 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 ADAM12O43184 909 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 AP1G2O75843 785 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 ABLIM3O94929 683 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 C1RP00736 705 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 FTLP02792 175 aaPredicted RBP14.38□□□□□ -0.11
PRPF18-201ENST00000320054 H2AFZP0C0S5 128 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 RPL17P18621 184 aaKnown RBP14.38□□□□□ -0.11
PRPF18-201ENST00000320054 MMP8P22894 467 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 BDNFP23560 247 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 NSFP46459 744 aaKnown RBP14.38□□□□□ -0.11
PRPF18-201ENST00000320054 PLA2G4AP47712 749 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 RPL34P49207 117 aaKnown RBP14.38□□□□□ -0.11
PRPF18-201ENST00000320054 VAV2P52735 878 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
PRPF18-201ENST00000320054 LRIT3Q3SXY7 679 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 RNF19BQ6ZMZ0 732 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 ZNF662Q6ZS27 426 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 CLEC20AQ6ZU45 233 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 H2AFVQ71UI9 128 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 MRPL43Q8N983 215 aaKnown RBP14.38□□□□□ -0.11
PRPF18-201ENST00000320054 MSANTD4Q8NCY6 345 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 C1orf131Q8NDD1 294 aaKnown RBP14.38□□□□□ -0.11
PRPF18-201ENST00000320054 ACRBPQ8NEB7 543 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 ZNF461Q8TAF7 563 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 CPA5Q8WXQ8 436 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 AUTS2Q8WXX7 1259 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 TRIM11Q96F44 468 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 HSFY1Q96LI6 401 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 DESI2Q9BSY9 194 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 EMILIN2Q9BXX0 1053 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 SLC4A5Q9BY07 1137 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 PNPLA8Q9NP80 782 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 DMAP1Q9NPF5 467 aaPredicted RBP14.38□□□□□ -0.11
PRPF18-201ENST00000320054 ENTPD7Q9NQZ7 604 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 KCND1Q9NSA2 647 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 KRT82Q9NSB4 513 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 AFF4Q9UHB7 1163 aaKnown RBP14.38□□□□□ -0.11
PRPF18-201ENST00000320054 CYTH4Q9UIA0 394 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 PPP2R2CQ9Y2T4 447 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 MYO9BQ13459 2157 aa14.38□□□□□ -0.11
PRPF18-201ENST00000320054 ANKRD62A6NC57 917 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 C2orf71A6NGG8 1288 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 TMCO5BA8MYB1 307 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 TEX28O15482 410 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 PJA2O43164 708 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 ZSCAN12O43309 604 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 LPXNO60711 386 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 VNN2O95498 520 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 CALB1P05937 261 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 ADH1AP07327 375 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 CNPP09543 421 aaKnown RBP14.37□□□□□ -0.11
PRPF18-201ENST00000320054 MYBL1P10243 752 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 GABRB2P47870 512 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 GALCP54803 685 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 ARPP19P56211 112 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 SNX16P57768 344 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 PTP4A2Q12974 167 aa14.37□□□□□ -0.11
PRPF18-201ENST00000320054 PDCLQ13371 301 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms