RNA–Protein interactions for RNA: ENST00000317578.6

SIX5-201, Transcript of SIX homeobox 5, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SIX5, Length 3,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5-201ENST00000317578 C9orf72Q96LT7 481 aa20.18■□□□□ 0.82
SIX5-201ENST00000317578 SERPINB12Q96P63 405 aa20.18■□□□□ 0.82
SIX5-201ENST00000317578 NR1H4Q96RI1 486 aaPredicted RBP20.18■□□□□ 0.82
SIX5-201ENST00000317578 C11orf70Q9BRQ4 267 aa20.18■□□□□ 0.82
SIX5-201ENST00000317578 NDE1Q9NXR1 346 aa20.18■□□□□ 0.82
SIX5-201ENST00000317578 FAF1Q9UNN5 650 aaPredicted RBP20.18■□□□□ 0.82
SIX5-201ENST00000317578 NAALADL1Q9UQQ1 740 aa20.18■□□□□ 0.82
SIX5-201ENST00000317578 TTLL13PA6NNM8 815 aa20.18■□□□□ 0.82
SIX5-201ENST00000317578 RNASEH1O60930 286 aaKnown RBP20.18■□□□□ 0.82
SIX5-201ENST00000317578 HAUS5O94927 633 aa20.18■□□□□ 0.82
SIX5-201ENST00000317578 CD151P48509 253 aa20.18■□□□□ 0.82
SIX5-201ENST00000317578 MTM1Q13496 603 aa20.18■□□□□ 0.82
SIX5-201ENST00000317578 C6orf163Q5TEZ5 329 aa20.18■□□□□ 0.82
SIX5-201ENST00000317578 RAB20Q9NX57 234 aa20.18■□□□□ 0.82
SIX5-201ENST00000317578 RBAKQ9NYW8 714 aaPredicted RBP20.18■□□□□ 0.82
SIX5-201ENST00000317578 MYH11P35749 1972 aa20.18■□□□□ 0.82
SIX5-201ENST00000317578 CLDN3O15551 220 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 WEE2P0C1S8 567 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 AMPD1P23109 780 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 GSTA3Q16772 222 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 HP1BP3Q5SSJ5 553 aaPredicted RBP20.17■□□□□ 0.82
SIX5-201ENST00000317578 C10orf76Q5T2E6 689 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 CCDC62Q6P9F0 684 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 FBXL13Q8NEE6 735 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 ACSF2Q96CM8 615 aaPredicted RBP20.17■□□□□ 0.82
SIX5-201ENST00000317578 HAPLN3Q96S86 360 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 XPNPEP1Q9NQW7 623 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 HSFX1Q9UBD0 423 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 TUBGCP4Q9UGJ1 667 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 SNCAIPQ9Y6H5 919 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 GSC2O15499 205 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 DGAT1O75907 488 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 KCNA2P16389 499 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 UBA1P22314 1058 aaKnown RBP20.17■□□□□ 0.82
SIX5-201ENST00000317578 MFAP3P55082 362 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 BTBD10Q9BSF8 475 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 FAM47DPA6NHR8 397 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 PODXLO00592 558 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 ATP6V1B1P15313 513 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 PLOD1Q02809 727 aaPredicted RBP20.17■□□□□ 0.82
SIX5-201ENST00000317578 MED21Q13503 144 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 ACVR2BQ13705 512 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 XKR3Q5GH77 459 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 MDH1BQ5I0G3 518 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 DCAF12L1Q5VU92 463 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 NANOGNBQ7Z5D8 188 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 STKLD1Q8NE28 680 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 HSPBAP1Q96EW2 488 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 CCDC77Q9BR77 488 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 NRBP2Q9NSY0 501 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 ARL8BQ9NVJ2 186 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 STX18Q9P2W9 335 aaKnown RBP20.17■□□□□ 0.82
SIX5-201ENST00000317578 AKT3Q9Y243 479 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 AFG3L2Q9Y4W6 797 aa20.17■□□□□ 0.82
SIX5-201ENST00000317578 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.17■□□□□ 0.82
SIX5-201ENST00000317578 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.16■□□□□ 0.82
SIX5-201ENST00000317578 DKC1O60832 514 aaKnown RBP eCLIP20.16■□□□□ 0.82
SIX5-201ENST00000317578 DNAJC6O75061 913 aa20.16■□□□□ 0.82
SIX5-201ENST00000317578 ZFXP17010 805 aaPredicted RBP20.16■□□□□ 0.82
SIX5-201ENST00000317578 WDR4P57081 412 aaKnown RBP20.16■□□□□ 0.82
SIX5-201ENST00000317578 MFSD5Q6N075 450 aa20.16■□□□□ 0.82
SIX5-201ENST00000317578 NOP9Q86U38 636 aaKnown RBP20.16■□□□□ 0.82
SIX5-201ENST00000317578 ALG3Q92685 438 aa20.16■□□□□ 0.82
SIX5-201ENST00000317578 HES6Q96HZ4 224 aa20.16■□□□□ 0.82
SIX5-201ENST00000317578 IVNS1ABPQ9Y6Y0 642 aa20.16■□□□□ 0.82
SIX5-201ENST00000317578 CAPN15O75808 1086 aa20.16■□□□□ 0.82
SIX5-201ENST00000317578 TNFSF9P41273 254 aa20.16■□□□□ 0.82
SIX5-201ENST00000317578 CCR3P51677 355 aa20.16■□□□□ 0.82
SIX5-201ENST00000317578 DPP9Q86TI2 863 aa20.16■□□□□ 0.82
SIX5-201ENST00000317578 LZICQ8WZA0 190 aa20.16■□□□□ 0.82
SIX5-201ENST00000317578 KRT35Q92764 455 aa20.16■□□□□ 0.82
SIX5-201ENST00000317578 EBF3Q9H4W6 596 aa20.16■□□□□ 0.82
SIX5-201ENST00000317578 PDE5AO76074 875 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 SUPT20HL2P0C7V6 817 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 TRPC3Q13507 836 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 SPARCL1Q14515 664 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 BRDTQ58F21 947 aaPredicted RBP20.15■□□□□ 0.82
SIX5-201ENST00000317578 MCPH1Q8NEM0 835 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 C17orf50Q8WW18 174 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 ECSITQ9BQ95 431 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 PORCNQ9H237 461 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 HEY2Q9UBP5 337 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 ALG6Q9Y672 507 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 ZNF831Q5JPB2 1677 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 GOLGA8SH3BPF8 625 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 PHF2O75151 1096 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 RBM44Q6ZP01 1051 aaKnown RBP20.15■□□□□ 0.82
SIX5-201ENST00000317578 GPD1LQ8N335 351 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 HIPK4Q8NE63 616 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 IMPG2Q9BZV3 1241 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 ZNF212Q9UDV6 495 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 BHMG1C9JSJ3 638 aaPredicted RBP20.15■□□□□ 0.82
SIX5-201ENST00000317578 LSM1O15116 133 aaKnown RBP20.15■□□□□ 0.82
SIX5-201ENST00000317578 CHKAP35790 457 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 SEL1L2Q5TEA6 688 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 TTC27Q6P3X3 843 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 CDHR1Q96JP9 859 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 MMP19Q99542 508 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 SYT17Q9BSW7 474 aa20.15■□□□□ 0.82
SIX5-201ENST00000317578 NUP85Q9BW27 656 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms