RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 TTC8Q8TAM2 541 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 USP13Q92995 863 aaPredicted RBP18.96■□□□□ 0.63
TPM1-203ENST00000317516 MRPL45Q9BRJ2 306 aaKnown RBP18.96■□□□□ 0.63
TPM1-203ENST00000317516 CRTAC1Q9NQ79 661 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 PRMT8Q9NR22 394 aaPredicted RBP18.96■□□□□ 0.63
TPM1-203ENST00000317516 FRMD4BQ9Y2L6 1034 aa18.96■□□□□ 0.63
TPM1-203ENST00000317516 TRAV19A0A0A6YYK7 116 aa18.95■□□□□ 0.62
TPM1-203ENST00000317516 A8MXQ7 604 aa18.95■□□□□ 0.62
TPM1-203ENST00000317516 USP17L7P0C7H9 530 aa18.95■□□□□ 0.62
TPM1-203ENST00000317516 PTPN1P18031 435 aaKnown RBP18.95■□□□□ 0.62
TPM1-203ENST00000317516 CXCL12P48061 93 aa18.95■□□□□ 0.62
TPM1-203ENST00000317516 SOX9P48436 509 aa18.95■□□□□ 0.62
TPM1-203ENST00000317516 CLDN10P78369 228 aa18.95■□□□□ 0.62
TPM1-203ENST00000317516 STKLD1Q8NE28 680 aa18.95■□□□□ 0.62
TPM1-203ENST00000317516 PCED1BQ96HM7 432 aa18.95■□□□□ 0.62
TPM1-203ENST00000317516 FAM83CQ9BQN1 747 aa18.95■□□□□ 0.62
TPM1-203ENST00000317516 KCTD10Q9H3F6 313 aa18.95■□□□□ 0.62
TPM1-203ENST00000317516 VRTNQ9H8Y1 702 aa18.95■□□□□ 0.62
TPM1-203ENST00000317516 TRPC7Q9HCX4 862 aa18.95■□□□□ 0.62
TPM1-203ENST00000317516 NR3C1P04150 777 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 P4HA1P13674 534 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 PPP3CCP48454 512 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 CASP4P49662 377 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 FAM160A1Q05DH4 1040 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 TNK2Q07912 1038 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 RUNX3Q13761 415 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 NCOA4Q13772 614 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 BECN1Q14457 450 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 PDGFRLQ15198 375 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 CCDC142Q17RM4 750 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 ZNF699Q32M78 642 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 ZNF667Q5HYK9 610 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 MDH1BQ5I0G3 518 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 DENND5BQ6ZUT9 1274 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 SYNPOQ8N3V7 929 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 SPEM1Q8N4L4 309 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 ZBTB44Q8NCP5 570 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 TMC2Q8TDI7 906 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 RUBCNQ92622 972 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 NELL1Q92832 810 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 EXOC4Q96A65 974 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 C8orf48Q96LL4 319 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 HINFPQ9BQA5 517 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 GZF1Q9H116 711 aaPredicted RBP18.94■□□□□ 0.62
TPM1-203ENST00000317516 XYLT2Q9H1B5 865 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 TRPM5Q9NZQ8 1165 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 CCL26Q9Y258 94 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 TSC2P49815 1807 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 FAM186AA6NE01 2351 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 CACNA1IQ9P0X4 2223 aa18.94■□□□□ 0.62
TPM1-203ENST00000317516 LRRIQ3A6PVS8 624 aaPredicted RBP18.93■□□□□ 0.62
TPM1-203ENST00000317516 IKBKBO14920 756 aa18.93■□□□□ 0.62
TPM1-203ENST00000317516 RHOBTB3O94955 611 aa18.93■□□□□ 0.62
TPM1-203ENST00000317516 C4BPAP04003 597 aaKnown RBP18.93■□□□□ 0.62
TPM1-203ENST00000317516 CKMP06732 381 aa18.93■□□□□ 0.62
TPM1-203ENST00000317516 PFKLP17858 780 aa18.93■□□□□ 0.62
TPM1-203ENST00000317516 HDCP19113 662 aa18.93■□□□□ 0.62
TPM1-203ENST00000317516 KCNB1Q14721 858 aa18.93■□□□□ 0.62
TPM1-203ENST00000317516 SGSM1Q2NKQ1 1148 aa18.93■□□□□ 0.62
TPM1-203ENST00000317516 TDRD10Q5VZ19 366 aaKnown RBP18.93■□□□□ 0.62
TPM1-203ENST00000317516 CEP135Q66GS9 1140 aa18.93■□□□□ 0.62
TPM1-203ENST00000317516 TSSK4Q6SA08 328 aa18.93■□□□□ 0.62
TPM1-203ENST00000317516 KRBA2Q6ZNG9 492 aa18.93■□□□□ 0.62
TPM1-203ENST00000317516 TNIP3Q96KP6 325 aa18.93■□□□□ 0.62
TPM1-203ENST00000317516 ELOVL4Q9GZR5 314 aa18.93■□□□□ 0.62
TPM1-203ENST00000317516 TRAF3IP3Q9Y228 551 aa18.93■□□□□ 0.62
TPM1-203ENST00000317516 RPL13P26373 211 aaKnown RBP18.92■□□□□ 0.62
TPM1-203ENST00000317516 PON2Q15165 354 aa18.92■□□□□ 0.62
TPM1-203ENST00000317516 TXNDC11Q6PKC3 985 aa18.92■□□□□ 0.62
TPM1-203ENST00000317516 B3GALNT2Q8NCR0 500 aa18.92■□□□□ 0.62
TPM1-203ENST00000317516 PLEKHO2Q8TD55 490 aa18.92■□□□□ 0.62
TPM1-203ENST00000317516 TAF4BQ92750 862 aa18.92■□□□□ 0.62
TPM1-203ENST00000317516 SECISBP2LQ93073 1101 aaKnown RBP18.92■□□□□ 0.62
TPM1-203ENST00000317516 CHAMP1Q96JM3 812 aa18.92■□□□□ 0.62
TPM1-203ENST00000317516 CYP2S1Q96SQ9 504 aa18.92■□□□□ 0.62
TPM1-203ENST00000317516 EBF3Q9H4W6 596 aa18.92■□□□□ 0.62
TPM1-203ENST00000317516 TCHHQ07283 1943 aa18.92■□□□□ 0.62
TPM1-203ENST00000317516 COL4A3Q01955 1670 aa18.92■□□□□ 0.62
TPM1-203ENST00000317516 USP34Q70CQ2 3546 aa18.91■□□□□ 0.62
TPM1-203ENST00000317516 F8VP50 259 aa18.91■□□□□ 0.62
TPM1-203ENST00000317516 MAPK13O15264 365 aa18.91■□□□□ 0.62
TPM1-203ENST00000317516 LILRB5O75023 590 aa18.91■□□□□ 0.62
TPM1-203ENST00000317516 TADA3O75528 432 aa18.91■□□□□ 0.62
TPM1-203ENST00000317516 ZNF202O95125 648 aa18.91■□□□□ 0.62
TPM1-203ENST00000317516 NOP14P78316 857 aaKnown RBP18.91■□□□□ 0.62
TPM1-203ENST00000317516 GRSF1Q12849 480 aaKnown RBP eCLIP18.91■□□□□ 0.62
TPM1-203ENST00000317516 DPYDQ12882 1025 aa18.91■□□□□ 0.62
TPM1-203ENST00000317516 MTF1Q14872 753 aa18.91■□□□□ 0.62
TPM1-203ENST00000317516 ARL14EPQ8N8R7 260 aaPredicted RBP18.91■□□□□ 0.62
TPM1-203ENST00000317516 SUMF1Q8NBK3 374 aa18.91■□□□□ 0.62
TPM1-203ENST00000317516 TTLL2Q9BWV7 592 aa18.91■□□□□ 0.62
TPM1-203ENST00000317516 ATP8B3O60423 1300 aa18.91■□□□□ 0.62
TPM1-203ENST00000317516 GOLGA6L4A6NEF3 574 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 TRIM21P19474 475 aaKnown RBP18.9■□□□□ 0.62
TPM1-203ENST00000317516 NR1H3Q13133 447 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 NFIL3Q16649 462 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 ZACNQ401N2 412 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 TRIM68Q6AZZ1 485 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 SV2AQ7L0J3 742 aa18.9■□□□□ 0.62
TPM1-203ENST00000317516 GUF1Q8N442 669 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms