RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 ACTL9Q8TC94 416 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 TMEM121Q9BTD3 319 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 PITPNM3Q9BZ71 974 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 CDT1Q9H211 546 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 MLXIPLQ9NP71 852 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.5■□□□□ 0.87
AP3S1-201ENST00000316788 SPDYE5A6NIY4 337 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 FOXO6A8MYZ6 492 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 TYROBPO43914 113 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 PCK1P35558 622 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 GEMIN4P57678 1058 aaKnown RBP20.5■□□□□ 0.87
AP3S1-201ENST00000316788 PLCB3Q01970 1234 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 TNFAIP2Q03169 654 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 MBTD1Q05BQ5 628 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 MYO1EQ12965 1108 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 FASTKD3Q14CZ7 662 aaKnown RBP20.5■□□□□ 0.87
AP3S1-201ENST00000316788 SCARA5Q6ZMJ2 495 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 IFNLR1Q8IU57 520 aaPredicted RBP20.5■□□□□ 0.87
AP3S1-201ENST00000316788 TTC39CQ8N584 583 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 JOSD2Q8TAC2 188 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 CPT1BQ92523 772 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 SMARCAD1Q9H4L7 1026 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 ARHGEF3Q9NR81 526 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 PRMT7Q9NVM4 692 aaPredicted RBP20.5■□□□□ 0.87
AP3S1-201ENST00000316788 SIX4Q9UIU6 781 aa20.5■□□□□ 0.87
AP3S1-201ENST00000316788 APOC4-APOC2K7ER74 178 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 NOP56O00567 594 aaKnown RBP20.49■□□□□ 0.87
AP3S1-201ENST00000316788 CST8O60676 142 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 ATP5HO75947 161 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 ZWINTO95229 277 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 ARIH2O95376 493 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 APOC2P02655 101 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 MCF2P10911 925 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 CD19P15391 556 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 IL1R2P27930 398 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 CTCFP49711 727 aaPredicted RBP20.49■□□□□ 0.87
AP3S1-201ENST00000316788 ZNF157P51786 506 aaPredicted RBP20.49■□□□□ 0.87
AP3S1-201ENST00000316788 YARSP54577 528 aaKnown RBP20.49■□□□□ 0.87
AP3S1-201ENST00000316788 PKN2Q16513 984 aaKnown RBP20.49■□□□□ 0.87
AP3S1-201ENST00000316788 ASRGL1Q7L266 308 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 ERO1BQ86YB8 467 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 LRRC71Q8N4P6 559 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 MIS12Q9H081 205 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 NOD2Q9HC29 1040 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 CYTH4Q9UIA0 394 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 POLIQ9UNA4 740 aa20.49■□□□□ 0.87
AP3S1-201ENST00000316788 CLUHO75153 1309 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 A0A0G2JLL6 359 aaPredicted RBP20.48■□□□□ 0.87
AP3S1-201ENST00000316788 POC1B-GALNT4F8VUJ3 575 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 CNMDO75829 334 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 STAU1O95793 577 aaKnown RBP20.48■□□□□ 0.87
AP3S1-201ENST00000316788 HMGCRP04035 888 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 P4HA1P13674 534 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 KRT15P19012 456 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 GPX6P59796 221 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 PTPN11Q06124 597 aaPredicted RBP20.48■□□□□ 0.87
AP3S1-201ENST00000316788 ZKSCAN8Q15776 578 aaPredicted RBP20.48■□□□□ 0.87
AP3S1-201ENST00000316788 WDR78Q5VTH9 848 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 EEF1DP3Q658K8 133 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 CCDC62Q6P9F0 684 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 PRRT2Q7Z6L0 340 aaPredicted RBP20.48■□□□□ 0.87
AP3S1-201ENST00000316788 RHPN2Q8IUC4 686 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 FITM2Q8N6M3 262 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 SLC4A11Q8NBS3 891 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 ALKBH8Q96BT7 664 aaKnown RBP20.48■□□□□ 0.87
AP3S1-201ENST00000316788 FGD4Q96M96 766 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 ASB7Q9H672 318 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 ACSS3Q9H6R3 686 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 RSAD1Q9HA92 442 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 RABGEF1Q9UJ41 708 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 PTPRFP10586 1907 aa20.48■□□□□ 0.87
AP3S1-201ENST00000316788 DNAJC25-GNG10A0A024R161 153 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 GOLGA8SH3BPF8 625 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 CILPO75339 1184 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 ENDOD1O94919 500 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 IFNB1P01574 187 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 RPL22P35268 128 aaKnown RBP20.47■□□□□ 0.87
AP3S1-201ENST00000316788 IRX3P78415 501 aaPredicted RBP20.47■□□□□ 0.87
AP3S1-201ENST00000316788 HSDL1Q3SXM5 330 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 RGMBQ6NW40 437 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 ADGRD1Q6QNK2 874 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 TBC1D1Q86TI0 1168 aaPredicted RBP20.47■□□□□ 0.87
AP3S1-201ENST00000316788 RASAL3Q86YV0 1011 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 C1orf127Q8N9H9 656 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 FBF1Q8TES7 1133 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 RSAD2Q8WXG1 361 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 ACSF2Q96CM8 615 aaPredicted RBP20.47■□□□□ 0.87
AP3S1-201ENST00000316788 HAUS1Q96CS2 278 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 ZWILCHQ9H900 591 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 ASNSD1Q9NWL6 643 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.47■□□□□ 0.87
AP3S1-201ENST00000316788 USH1CQ9Y6N9 552 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 CEP350Q5VT06 3117 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 INO80B-WBP1J3KQ70 363 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 EDF1O60869 148 aaKnown RBP20.47■□□□□ 0.87
AP3S1-201ENST00000316788 RNF8O76064 485 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 ERBB2P04626 1255 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 VDRP11473 427 aa20.47■□□□□ 0.87
AP3S1-201ENST00000316788 EZRP15311 586 aaKnown RBP20.47■□□□□ 0.87
AP3S1-201ENST00000316788 MARK3P27448 753 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms