RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 ANKRD63C9JTQ0 380 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 ADCY6O43306 1168 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 ALDH1A2O94788 518 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 HIST1H2AGP0C0S8 130 aaPredicted RBP9.4□□□□□ -0.91
CTC1-201ENST00000315684 HIST1H2ADP20671 130 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 BCAT1P54687 386 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 MAP7Q14244 749 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 PRRT2Q7Z6L0 340 aaPredicted RBP9.4□□□□□ -0.91
CTC1-201ENST00000315684 SLC47A2Q86VL8 602 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 DAGLBQ8NCG7 672 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 FBXO22Q8NEZ5 403 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 MCRS1Q96EZ8 462 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 HIST1H2AHQ96KK5 128 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 LRGUKQ96M69 825 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 FMO2Q99518 471 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 CHP1Q99653 195 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 HIST1H2AJQ99878 128 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 H2AFJQ9BTM1 129 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 SPAG7O75391 227 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 OR1E1P30953 314 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 SOX11P35716 441 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 GALCP54803 685 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 FSTL1Q12841 308 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 TARBP2Q15633 366 aaKnown RBP9.4□□□□□ -0.91
CTC1-201ENST00000315684 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.4□□□□□ -0.91
CTC1-201ENST00000315684 SCG3Q8WXD2 468 aaKnown RBP9.4□□□□□ -0.91
CTC1-201ENST00000315684 DNAJC7Q99615 494 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 FTHL17Q9BXU8 183 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 ALG13Q9NP73 1137 aaKnown RBP9.4□□□□□ -0.91
CTC1-201ENST00000315684 SLC39A10Q9ULF5 831 aa9.4□□□□□ -0.91
CTC1-201ENST00000315684 TDRKHQ9Y2W6 561 aaKnown RBP9.4□□□□□ -0.91
CTC1-201ENST00000315684 RHOBTB3O94955 611 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 CLTBP09497 229 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 CTSEP14091 401 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 RPL17P18621 184 aaKnown RBP9.39□□□□□ -0.91
CTC1-201ENST00000315684 TOB1P50616 345 aaPredicted RBP9.39□□□□□ -0.91
CTC1-201ENST00000315684 CCDC149Q6ZUS6 474 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 CD302Q8IX05 232 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 ADSSL1Q8N142 457 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 SPATA18Q8TC71 538 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 FAM172AQ8WUF8 416 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 SUSD6Q92537 303 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 NCLNQ969V3 563 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 ARHGAP39Q9C0H5 1083 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 MCF2P10911 925 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 GABRR2P28476 465 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 DENND5BQ6ZUT9 1274 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 TEKT4Q8WW24 435 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 SLC5A5Q92911 643 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 PCDHB9Q9Y5E1 797 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 RPTORQ8N122 1335 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 NCF1BA6NI72 391 aaPredicted RBP9.39□□□□□ -0.91
CTC1-201ENST00000315684 NCF1CA8MVU1 366 aaPredicted RBP9.39□□□□□ -0.91
CTC1-201ENST00000315684 NCF1P14598 390 aaPredicted RBP9.39□□□□□ -0.91
CTC1-201ENST00000315684 KDSRQ06136 332 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 TRIM60Q495X7 471 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 ZNF720Q7Z2F6 126 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 PANX2Q96RD6 677 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 C20orf96Q9NUD7 363 aaPredicted RBP9.39□□□□□ -0.91
CTC1-201ENST00000315684 SFMBT1Q9UHJ3 866 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 TSPAN16Q9UKR8 245 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 PADI3Q9ULW8 664 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 PIK3C2AO00443 1686 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 ESYT3A0FGR9 886 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 DUSP4Q13115 394 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 SMG7Q92540 1137 aaKnown RBP9.39□□□□□ -0.91
CTC1-201ENST00000315684 PLK2Q9NYY3 685 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 ITGA11Q9UKX5 1188 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 ZNF263O14978 683 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 PER2O15055 1255 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 MICAL2O94851 1124 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 NFICP08651 508 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 HSPA6P17066 643 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 ETF1P62495 437 aaKnown RBP9.39□□□□□ -0.91
CTC1-201ENST00000315684 SNAP47Q5SQN1 464 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 CCDC137Q6PK04 289 aaKnown RBP9.39□□□□□ -0.91
CTC1-201ENST00000315684 TMC5Q6UXY8 1006 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 WDR49Q8IV35 697 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 PPTC7Q8NI37 304 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 PTPRN2Q92932 1015 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 SMYD3Q9H7B4 428 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 CD274Q9NZQ7 290 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 VANGL2Q9ULK5 521 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 IQANK1A0A1B0GTG1 560 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 NDUFB5O43674 189 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 SESN3P58005 492 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 FAM71DQ8N9W8 422 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 SMARCD1Q96GM5 515 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 B3GALT6Q96L58 329 aa9.39□□□□□ -0.91
CTC1-201ENST00000315684 VDRP11473 427 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 OAS2P29728 719 aaKnown RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 TUFMP49411 452 aaKnown RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 PIGHQ14442 188 aaPredicted RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 SPDYE7PQ495Y7 208 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 SLFN11Q7Z7L1 901 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 CHPFQ8IZ52 775 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 TMA16Q96EY4 203 aaKnown RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 FAM84AQ96KN4 292 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 ALDH8A1Q9H2A2 487 aaPredicted RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 FAM105AQ9NUU6 356 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms