RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 GPR149Q86SP6 731 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 B3GALNT2Q8NCR0 500 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 RNF214Q8ND24 703 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 ST13P5Q8NFI4 369 aaPredicted RBP8.37□□□□□ -1.07
CDC42-201ENST00000315554 MYCBPAPQ8TBZ2 947 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 SPATA18Q8TC71 538 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 FAM200AQ8TCP9 573 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 PCED1BQ96HM7 432 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 KREMEN1Q96MU8 473 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 NECAB3Q96P71 396 aaPredicted RBP8.37□□□□□ -1.07
CDC42-201ENST00000315554 ASB2Q96Q27 587 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 CORO1BQ9BR76 489 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 MED10Q9BTT4 135 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 LSM14BQ9BX40 385 aaKnown RBP8.37□□□□□ -1.07
CDC42-201ENST00000315554 OXCT2Q9BYC2 517 aaPredicted RBP8.37□□□□□ -1.07
CDC42-201ENST00000315554 B3GNT5Q9BYG0 378 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 ZNF518BQ9C0D4 1074 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 POMKQ9H5K3 350 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 CYP3A43Q9HB55 503 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 SIX2Q9NPC8 291 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 ZDHHC7Q9NXF8 308 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 CEP72Q9P209 647 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 PCDHB4Q9Y5E5 795 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 COL6A3P12111 3177 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 TPM2P07951 284 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 HNRNPA1P09651 372 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDC42-201ENST00000315554 FAM163BP0C2L3 166 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 PNMA6AP0CW24 399 aaPredicted RBP8.36□□□□□ -1.07
CDC42-201ENST00000315554 GJA1P17302 382 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 ATF6P18850 670 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 ACO1P21399 889 aaKnown RBP8.36□□□□□ -1.07
CDC42-201ENST00000315554 ALDH1A3P47895 512 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 RAD23BP54727 409 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 ITIH3Q06033 890 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 INCA1Q0VD86 236 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 MTMR3Q13615 1198 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 CBX2Q14781 532 aaPredicted RBP8.36□□□□□ -1.07
CDC42-201ENST00000315554 NFE2Q16621 373 aaPredicted RBP8.36□□□□□ -1.07
CDC42-201ENST00000315554 ATAT1Q5SQI0 421 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 TMEM270Q6UE05 265 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 APTXQ7Z2E3 356 aaKnown RBP8.36□□□□□ -1.07
CDC42-201ENST00000315554 FAM35AQ86V20 835 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 UNC93AQ86WB7 457 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 UBR7Q8N806 425 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 SLC4A11Q8NBS3 891 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 ANKRD20A12PQ8NF67 263 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 CMASQ8NFW8 434 aaPredicted RBP8.36□□□□□ -1.07
CDC42-201ENST00000315554 SPPL2BQ8TCT7 592 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 SLC2A14Q8TDB8 520 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 HDAC7Q8WUI4 952 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 ATXN2LQ8WWM7 1075 aaKnown RBP8.36□□□□□ -1.07
CDC42-201ENST00000315554 ING5Q8WYH8 240 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 SUSD6Q92537 303 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 JAKMIP2Q96AA8 810 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 TNIP3Q96KP6 325 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 HEXIM2Q96MH2 286 aaKnown RBP8.36□□□□□ -1.07
CDC42-201ENST00000315554 NT5C1AQ9BXI3 368 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 TMEM30AQ9NV96 361 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 DNMT3BQ9UBC3 853 aaKnown RBP8.36□□□□□ -1.07
CDC42-201ENST00000315554 DPP7Q9UHL4 492 aa8.36□□□□□ -1.07
CDC42-201ENST00000315554 PRUNE2Q8WUY3 3088 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 LGALS16A8MUM7 142 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 F8VP50 259 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 GOLGA6L19H0YKK7 550 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
CDC42-201ENST00000315554 EPHB6O15197 1021 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 TEX33O43247 280 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 XYLBO75191 536 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 C1RP00736 705 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 RHOP08100 348 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 MYL4P12829 197 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 BMP1P13497 986 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 KRT5P13647 590 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 CD19P15391 556 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 TBXAS1P24557 533 aaPredicted RBP8.35□□□□□ -1.07
CDC42-201ENST00000315554 GRIK1P39086 918 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 USP8P40818 1118 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 MTHFRP42898 656 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 EPHB3P54753 998 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 UBXN1Q04323 297 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 IFRD2Q12894 506 aaPredicted RBP8.35□□□□□ -1.07
CDC42-201ENST00000315554 PLD1Q13393 1074 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 RAPGEF1Q13905 1077 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 SYCP1Q15431 976 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 SMAD2Q15796 467 aaKnown RBP8.35□□□□□ -1.07
CDC42-201ENST00000315554 AAK1Q2M2I8 961 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 SLC5A9Q2M3M2 681 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 UVSSAQ2YD98 709 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 FKBP15Q5T1M5 1219 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 IQCEQ6IPM2 695 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 DPY19L2P1Q6NXN4 242 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 C4orf50Q6ZRC1 276 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 PAQR9Q6ZVX9 377 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 GET4Q7L5D6 327 aaPredicted RBP8.35□□□□□ -1.07
CDC42-201ENST00000315554 FUKQ8N0W3 1084 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 RBBP8NLQ8NC74 664 aaPredicted RBP8.35□□□□□ -1.07
CDC42-201ENST00000315554 ITFG1Q8TB96 612 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 C2orf15Q8WU43 125 aaKnown RBP8.35□□□□□ -1.07
CDC42-201ENST00000315554 TCEAL4Q96EI5 215 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 TMEM176AQ96HP8 235 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms