RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 OTOAQ7RTW8 1153 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 TMEM192Q8IY95 271 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 C1QTNF1Q9BXJ1 281 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 SLC2A11Q9BYW1 496 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 NOD2Q9HC29 1040 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 ZFYVE28Q9HCC9 887 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 C15orf41Q9Y2V0 281 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 PLXND1Q9Y4D7 1925 aa8.27□□□□□ -1.09
CNOT4-201ENST00000315544 CEP104O60308 925 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 EXOC3O60645 756 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 EFEMP2O95967 443 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 ETS1P14921 441 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 CUL2Q13617 745 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 SLMAPQ14BN4 828 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 EFTUD2Q15029 972 aaKnown RBP eCLIP8.26□□□□□ -1.09
CNOT4-201ENST00000315544 SPOPLQ6IQ16 392 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 TAPT1Q6NXT6 567 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 OLFML1Q6UWY5 402 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 RNF207Q6ZRF8 634 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 BBS12Q6ZW61 710 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 BRSK2Q8IWQ3 736 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 ADGRF2Q8IZF7 708 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 SNF8Q96H20 258 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 TRAIPQ9BWF2 469 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 TEKT3Q9BXF9 490 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 ACSS3Q9H6R3 686 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 DONSONQ9NYP3 566 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 ZNF180Q9UJW8 692 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 NUP210LQ5VU65 1888 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 TMEM120BA0PK00 339 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 FAM159BA6NKW6 160 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 HAS3O00219 553 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 STRNO43815 780 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 RPA3P35244 121 aaPredicted RBP8.26□□□□□ -1.09
CNOT4-201ENST00000315544 ZFP36L2P47974 494 aaKnown RBP8.26□□□□□ -1.09
CNOT4-201ENST00000315544 IHHQ14623 411 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 USH1GQ495M9 461 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 ODR4Q5SWX8 454 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 SLC17A8Q8NDX2 589 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 FAM13CQ8NE31 585 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 SLC10A4Q96EP9 437 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 ZBTB45Q96K62 511 aaPredicted RBP8.26□□□□□ -1.09
CNOT4-201ENST00000315544 APBA2Q99767 749 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 STRIP2Q9ULQ0 834 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 PCDHB13Q9Y5F0 798 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 CASQ2O14958 399 aaPredicted RBP8.26□□□□□ -1.09
CNOT4-201ENST00000315544 SLC25A27O95847 323 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 CD4P01730 458 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 ERBB2P04626 1255 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 SUPT20HL2P0C7V6 817 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 GRIA2P42262 883 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 NAMPTP43490 491 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 JAK3P52333 1124 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 GPS2Q13227 327 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 KRT72Q14CN4 511 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 ENOX2Q16206 610 aaKnown RBP8.26□□□□□ -1.09
CNOT4-201ENST00000315544 LONRF1Q17RB8 773 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 ZPBP2Q6X784 338 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 BZW1Q7L1Q6 419 aaKnown RBP8.26□□□□□ -1.09
CNOT4-201ENST00000315544 SIGLEC10Q96LC7 697 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 TSEN34Q9BSV6 310 aaKnown RBP8.26□□□□□ -1.09
CNOT4-201ENST00000315544 C10orf88Q9H8K7 445 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 ATP8A1Q9Y2Q0 1164 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 IVNS1ABPQ9Y6Y0 642 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 PCM1Q15154 2024 aa8.26□□□□□ -1.09
CNOT4-201ENST00000315544 ZSCAN5DPP0CG00 497 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 RARBP10826 455 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 RALAP11233 206 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 PECAM1P16284 738 aaPredicted RBP8.25□□□□□ -1.09
CNOT4-201ENST00000315544 SP3Q02447 781 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 TAF5Q15542 800 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 MFSD7Q6UXD7 560 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 SEPT14Q6ZU15 432 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 PRPF39Q86UA1 669 aaKnown RBP8.25□□□□□ -1.09
CNOT4-201ENST00000315544 FAM178BQ8IXR5 827 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 ATL2Q8NHH9 583 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 TRIB2Q92519 343 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 CCDC47Q96A33 483 aaKnown RBP8.25□□□□□ -1.09
CNOT4-201ENST00000315544 CADM1Q9BY67 442 aaKnown RBP8.25□□□□□ -1.09
CNOT4-201ENST00000315544 RAB17Q9H0T7 212 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 C1orf21Q9H246 121 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 KLHL14Q9P2G3 628 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 SHOC2Q9UQ13 582 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 C2CD4BA6NLJ0 364 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 TMCO5BA8MYB1 307 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 CHUKO15111 745 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 SLC16A4O15374 487 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 TIAL1Q01085 375 aaKnown RBP eCLIP8.25□□□□□ -1.09
CNOT4-201ENST00000315544 CAV1Q03135 178 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 TCP10Q12799 353 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 MTMR2Q13614 643 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 COL19A1Q14993 1142 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 MORF4L2Q15014 288 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 FXNQ16595 210 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 ADGRG6Q86SQ4 1221 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 MYLK4Q86YV6 388 aaPredicted RBP8.25□□□□□ -1.09
CNOT4-201ENST00000315544 FMNL3Q8IVF7 1028 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 GPD1LQ8N335 351 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 SLC44A1Q8WWI5 657 aa8.25□□□□□ -1.09
CNOT4-201ENST00000315544 PI4K2AQ9BTU6 479 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms