RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 SLC13A4Q9UKG4 626 aa14.33□□□□□ -0.12
SPAST-201ENST00000315285 VHLP40337 213 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 DGKDQ16760 1214 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 DCAF4L1Q3SXM0 396 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 GLRA4Q5JXX5 417 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 ACOT1Q86TX2 421 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 NOP9Q86U38 636 aaKnown RBP14.32□□□□□ -0.12
SPAST-201ENST00000315285 CNPY3Q9BT09 278 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 TRIM54Q9BYV2 358 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 MRGBPQ9NV56 204 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 RRN3P2A6NIE6 340 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 RARAP10276 462 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 EPHB2P29323 1055 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 COPAP53621 1224 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 ABCE1P61221 599 aaKnown RBP14.32□□□□□ -0.12
SPAST-201ENST00000315285 MRPS35P82673 323 aaKnown RBP14.32□□□□□ -0.12
SPAST-201ENST00000315285 GCNT1Q02742 428 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 CBWD6Q4V339 395 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 CBWD3Q5JTY5 395 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 CBWD5Q5RIA9 395 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 PRUNE1Q86TP1 453 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 SETD3Q86TU7 594 aaPredicted RBP14.32□□□□□ -0.12
SPAST-201ENST00000315285 GPRC5AQ8NFJ5 357 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 ASPSCR1Q9BZE9 553 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 CATSPERBQ9H7T0 1116 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 AFF4Q9UHB7 1163 aaKnown RBP14.32□□□□□ -0.12
SPAST-201ENST00000315285 USP18Q9UMW8 372 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 PCDHA3Q9Y5H8 950 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 IQCA1LA6NCM1 817 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 PIK3CDO00329 1044 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 EPHB6O15197 1021 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 RPS6KA5O75582 802 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 AMHR2Q16671 573 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 DENND5BQ6ZUT9 1274 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 FAM172AQ8WUF8 416 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 GPATCH2LQ9NWQ4 482 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.32□□□□□ -0.12
SPAST-201ENST00000315285 STX18Q9P2W9 335 aaKnown RBP14.32□□□□□ -0.12
SPAST-201ENST00000315285 TMEM247A6NEH6 219 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 M0QYT0 321 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 ZBTB39O15060 712 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 GLRA3O75311 464 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 PRKCIP41743 596 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 ATXN3P54252 364 aaPredicted RBP14.32□□□□□ -0.12
SPAST-201ENST00000315285 APOBEC3HQ6NTF7 200 aaKnown RBP14.32□□□□□ -0.12
SPAST-201ENST00000315285 GTF3C2Q8WUA4 911 aaPredicted RBP14.32□□□□□ -0.12
SPAST-201ENST00000315285 KCNQ5Q9NR82 932 aa14.32□□□□□ -0.12
SPAST-201ENST00000315285 C16orf87Q6PH81 154 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 SH3TC2Q8TF17 1288 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 PCDH9Q9HC56 1237 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 CASP5P51878 434 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 VCPP55072 806 aaKnown RBP14.31□□□□□ -0.12
SPAST-201ENST00000315285 CCNJLQ8IV13 435 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 SLC25A41Q8N5S1 370 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 PCYOX1LQ8NBM8 494 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 SPIRE2Q8WWL2 714 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 ZNF606Q8WXB4 792 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 HAS1Q92839 578 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 CEP19Q96LK0 163 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 IDI2Q9BXS1 227 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 SHOC2Q9UQ13 582 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 AKAP10O43572 662 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 TGM2P21980 687 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 RAP1GAPP47736 663 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 PTPN11Q06124 597 aaPredicted RBP14.31□□□□□ -0.12
SPAST-201ENST00000315285 SLC26A11Q86WA9 606 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 ANKRD13AQ8IZ07 590 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 LRRC4BQ9NT99 713 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 RCCD1A6NED2 376 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 NDUFS3O75489 264 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 HMBSP08397 361 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 STAG3L1P0CL83 205 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 TCN1P20061 433 aaPredicted RBP14.31□□□□□ -0.12
SPAST-201ENST00000315285 LAMB3Q13751 1172 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 RCN1Q15293 331 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 GRAMD4Q6IC98 578 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 CD302Q8IX05 232 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 SHCBP1LQ9BZQ2 653 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 DDIT4Q9NX09 232 aa14.31□□□□□ -0.12
SPAST-201ENST00000315285 LOC102724159A0A0B4J2E5 919 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 ZNF263O14978 683 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 ESRRBO95718 433 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 SKOR1P84550 965 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 ZBTB17Q13105 803 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 VEPH1Q14D04 833 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 PWP2Q15269 919 aaKnown RBP14.3□□□□□ -0.12
SPAST-201ENST00000315285 ZNF484Q5JVG2 852 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 KCNMB3Q9NPA1 279 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 ARHGAP23Q9P227 1491 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 SDR42E2A6NKP2 422 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 DNAJC6O75061 913 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 DGKIO75912 1065 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 SEC24DO94855 1032 aaPredicted RBP14.3□□□□□ -0.12
SPAST-201ENST00000315285 TMCC1O94876 653 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 HMOX2P30519 316 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 SLC15A2Q16348 729 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 NIPA1Q7RTP0 329 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 IFNEQ86WN2 208 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 DNAJC19Q96DA6 116 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 PARK7Q99497 189 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms