RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 NRCAMQ92823 1304 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 C6orf222P0C671 652 aaPredicted RBP13.07□□□□□ -0.32
RNF4-201ENST00000314289 ATF2P15336 505 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 IVDP26440 423 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 GRM5P41594 1212 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 ATP11AP98196 1134 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 OR6B2Q6IFH4 312 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 LRIG3Q6UXM1 1119 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 CCDC121Q6ZUS5 278 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 ZNF410Q86VK4 478 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 OR6B3Q8NGW1 331 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 LRRN4Q8WUT4 740 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 ZNF518BQ9C0D4 1074 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 ARHGAP39Q9C0H5 1083 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 MIS12Q9H081 205 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 KLC4Q9NSK0 619 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 BARX2Q9UMQ3 279 aaPredicted RBP13.07□□□□□ -0.32
RNF4-201ENST00000314289 HMGB1P1B2RPK0 211 aaPredicted RBP13.07□□□□□ -0.32
RNF4-201ENST00000314289 TNPO2O14787 897 aaKnown RBP13.07□□□□□ -0.32
RNF4-201ENST00000314289 GAS8O95995 478 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 HOXD8P13378 290 aaPredicted RBP13.07□□□□□ -0.32
RNF4-201ENST00000314289 DARSP14868 501 aaKnown RBP13.07□□□□□ -0.32
RNF4-201ENST00000314289 YARSP54577 528 aaKnown RBP13.07□□□□□ -0.32
RNF4-201ENST00000314289 IFI35P80217 286 aaPredicted RBP13.07□□□□□ -0.32
RNF4-201ENST00000314289 KYNUQ16719 465 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 GOLGA7BQ2TAP0 167 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 TRNP1Q6NT89 227 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 CAPN12Q6ZSI9 719 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 SCUBE3Q8IX30 993 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 CDC42EP4Q9H3Q1 356 aaKnown RBP13.07□□□□□ -0.32
RNF4-201ENST00000314289 ITGA11Q9UKX5 1188 aa13.07□□□□□ -0.32
RNF4-201ENST00000314289 ATXN2Q99700 1313 aaKnown RBP13.06□□□□□ -0.32
RNF4-201ENST00000314289 GOLGA6L7A0A1B0GV03 622 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 SIGLEC16A6NMB1 481 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 MEIS3P2A8K0S8 358 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 MAP3K6O95382 1288 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 FAM107AO95990 144 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 PAEPP09466 180 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 CTSHP09668 335 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 P4HA1P13674 534 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 PSEN2P49810 448 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 PIGHQ14442 188 aaPredicted RBP13.06□□□□□ -0.32
RNF4-201ENST00000314289 SNX17Q15036 470 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 LONRF1Q17RB8 773 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 P3H1Q32P28 736 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 SYCP2LQ5T4T6 812 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 CEP57Q86XR8 500 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 GIMAP7Q8NHV1 300 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 NT5C1AQ9BXI3 368 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 CALN1Q9BXU9 219 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 ANAPC5Q9UJX4 755 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 C2CD2Q9Y426 696 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 RRN3P2A6NIE6 340 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 UNCXA6NJT0 531 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 PGK1P00558 417 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 LMO2P25791 158 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 MYO1EQ12965 1108 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 PMF1Q6P1K2 205 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 NOTUMQ6P988 496 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 RCOR2Q8IZ40 523 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 SNF8Q96H20 258 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 C9orf72Q96LT7 481 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 ZFP42Q96MM3 310 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 CFAP57Q96MR6 1250 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 LHX5Q9H2C1 402 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 SLC40A1Q9NP59 571 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 STRIP2Q9ULQ0 834 aa13.06□□□□□ -0.32
RNF4-201ENST00000314289 GOLGA8MH3BSY2 632 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 SPTLC1O15269 473 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 RIPK2O43353 540 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 ADORA2BP29275 332 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 MIPP30301 263 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 ATICP31939 592 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 CDKN2BP42772 138 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 MMRN1Q13201 1228 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 BYSLQ13895 437 aaKnown RBP13.05□□□□□ -0.32
RNF4-201ENST00000314289 CCNG2Q16589 344 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 IZUMO3Q5VZ72 239 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 SCYL2Q6P3W7 929 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 FAM183BPQ6ZVS7 135 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 SNX27Q96L92 541 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 CTNNAL1Q9UBT7 734 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 hCG_1818297A0A087WSY0 165 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 LIASO43766 372 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 CST8O60676 142 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 PFKMP08237 780 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 VDRP11473 427 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 CCDC130P13994 396 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 SLC25A11Q02978 314 aaKnown RBP13.05□□□□□ -0.32
RNF4-201ENST00000314289 SOX4Q06945 474 aaPredicted RBP13.05□□□□□ -0.32
RNF4-201ENST00000314289 ADCY1Q08828 1119 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 CRHR2Q13324 411 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 PTK6Q13882 451 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 SPRED3Q2MJR0 410 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 TFDP3Q5H9I0 405 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 CXCL17Q6UXB2 119 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 TTC30AQ86WT1 665 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 ARRDC4Q8NCT1 418 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 CLEC4CQ8WTT0 213 aa13.05□□□□□ -0.32
RNF4-201ENST00000314289 RBM41Q96IZ5 413 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms