RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 TMEM184AQ6ZMB5 413 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 RTL10Q7L3V2 364 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 ZNF677Q86XU0 584 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 DRC7Q8IY82 874 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 ANKRD52Q8NB46 1076 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 KREMEN2Q8NCW0 462 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 SLC20A1Q8WUM9 679 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 SMARCD1Q96GM5 515 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 GAS2L1Q99501 681 aaPredicted RBP13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 RHOBTB2Q9BYZ6 727 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 PLEKHA4Q9H4M7 779 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 KRT82Q9NSB4 513 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 SLC27A5Q9Y2P5 690 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 ATP8B3O60423 1300 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 MYO7AQ13402 2215 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 SERPING1P05155 500 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 CFHP08603 1231 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 SPATA31D3P0C874 917 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 FAM200BP0CF97 657 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 FECHP22830 423 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 TUFMP49411 452 aaKnown RBP13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 BCAT1P54687 386 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 FMO1Q01740 532 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 DENND1BQ6P3S1 775 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 CLEC20AQ6ZU45 233 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 SPATA31D4Q6ZUB0 917 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 EFHBQ8N7U6 833 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 SPC24Q8NBT2 197 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 ZMIZ2Q8NF64 920 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 MYLIPQ8WY64 445 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 PDLIM2Q96JY6 352 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 C8orf48Q96LL4 319 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 SMOQ99835 787 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 MED10Q9BTT4 135 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 DUSP16Q9BY84 665 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 LHX5Q9H2C1 402 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 HAUS4Q9H6D7 363 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 CYP4F11Q9HBI6 524 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 YIPF1Q9Y548 306 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 BZW2Q9Y6E2 419 aaKnown RBP13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 ATG2AQ2TAZ0 1938 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 TTC28Q96AY4 2481 aa13.4□□□□□ -0.26
CHMP2A-201ENST00000312547 AP1G2O75843 785 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 BEST1O76090 585 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 GLP2RO95838 553 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 C8AP07357 584 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 MMEP08473 750 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 SETSIPP0DME0 302 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 SKILP12757 684 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 NPR3P17342 541 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 ATF6P18850 670 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 IGFBP4P22692 258 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 ELF1P32519 619 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 CDH5P33151 784 aaPredicted RBP13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 GPD2P43304 727 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 RBM10P98175 930 aaKnown RBP13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 CDK17Q00537 523 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 KLHL30Q0D2K2 578 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 ADAM15Q13444 863 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 CTC1Q2NKJ3 1217 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 TAF3Q5VWG9 929 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 CCDC149Q6ZUS6 474 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 ZNF571Q7Z3V5 609 aaPredicted RBP13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 WDTC1Q8N5D0 677 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 SLC7A14Q8TBB6 771 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 SLC35F5Q8WV83 523 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 CEP295NLQ96MC4 621 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 PANX2Q96RD6 677 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 KCNK16Q96T55 309 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 PCDHB18PQ96TA0 734 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 SEPT5Q99719 369 aaPredicted RBP13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 AGPAT1Q99943 283 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 COL25A1Q9BXS0 654 aaPredicted RBP13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 UBXN6Q9BZV1 441 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 DMAP1Q9NPF5 467 aaPredicted RBP13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 MAN1C1Q9NR34 630 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 ARHGAP20Q9P2F6 1191 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 HESX1Q9UBX0 185 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 DPP7Q9UHL4 492 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 INSL5Q9Y5Q6 135 aa13.39□□□□□ -0.27
CHMP2A-201ENST00000312547 HHLA1C9JL84 531 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 F8VP50 259 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 M0QYV0 167 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 TULP2O00295 520 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 PRRG1O14668 218 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 TRIM66O15016 1216 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 LINC01565O15544 149 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 ZMYND10O75800 440 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 SOAT2O75908 522 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 CYP1A1P04798 512 aaPredicted RBP13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 PLEKP08567 350 aaPredicted RBP13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 POU2F2P09086 479 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 HOXA9P31269 272 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 SSTR3P32745 418 aaPredicted RBP13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 RPL34P49207 117 aaKnown RBP13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 GPR15P49685 360 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 RPL10AP62906 217 aaKnown RBP13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 PDE4CQ08493 712 aa13.38□□□□□ -0.27
CHMP2A-201ENST00000312547 BST2Q10589 180 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms