RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 hCG_2014768A0A024R1R8 64 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 ZWINTO95229 277 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 RALAP11233 206 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 GARTP22102 1010 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 ABCD1P33897 745 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 DMP1Q13316 513 aaPredicted RBP19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 C2CD6Q53TS8 623 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 SPDYAQ5MJ70 313 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 ZNF365Q70YC5 407 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 ANKS1BQ7Z6G8 1248 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 TDRPQ86YL5 185 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 KATNAL2Q8IYT4 538 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 ZNF276Q8N554 614 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 CLEC4DQ8WXI8 215 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 VCPIP1Q96JH7 1222 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 FAM161BQ96MY7 647 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 VPS37BQ9H9H4 285 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 COL20A1Q9P218 1284 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 CCPG1Q9ULG6 757 aa19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 SMG5Q9UPR3 1016 aaKnown RBP19.78■□□□□ 0.76
HERPUD2-201ENST00000311350 UMODL1Q5DID0 1318 aa19.77■□□□□ 0.76
HERPUD2-201ENST00000311350 PGM1P36871 562 aa19.77■□□□□ 0.76
HERPUD2-201ENST00000311350 LSAMPQ13449 338 aa19.77■□□□□ 0.76
HERPUD2-201ENST00000311350 EFTUD2Q15029 972 aaKnown RBP eCLIP19.77■□□□□ 0.76
HERPUD2-201ENST00000311350 SV2AQ7L0J3 742 aa19.77■□□□□ 0.76
HERPUD2-201ENST00000311350 TNS4Q8IZW8 715 aa19.77■□□□□ 0.76
HERPUD2-201ENST00000311350 SLC10A4Q96EP9 437 aa19.77■□□□□ 0.76
HERPUD2-201ENST00000311350 NR1H4Q96RI1 486 aaPredicted RBP19.77■□□□□ 0.76
HERPUD2-201ENST00000311350 VCX3BQ9H321 246 aa19.77■□□□□ 0.76
HERPUD2-201ENST00000311350 KCNK13Q9HB14 408 aa19.77■□□□□ 0.76
HERPUD2-201ENST00000311350 VCX3AQ9NNX9 186 aa19.77■□□□□ 0.76
HERPUD2-201ENST00000311350 SLC17A7Q9P2U7 560 aa19.77■□□□□ 0.76
HERPUD2-201ENST00000311350 NDC80O14777 642 aa19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 ZSCAN9O15535 394 aaPredicted RBP19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 TROVE2P10155 538 aaKnown RBP eCLIP19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 ETS1P14921 441 aa19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 CAP2P40123 477 aa19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 NPTX2P47972 431 aa19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 USP46P62068 366 aa19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 ZBTB16Q05516 673 aa19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 SPP2Q13103 211 aa19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 C15orf39Q6ZRI6 1047 aa19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 RHOT1Q8IXI2 618 aa19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 ZCCHC9Q8N567 271 aaKnown RBP19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 CCDC127Q96BQ5 260 aa19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 CLMNQ96JQ2 1002 aa19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 TTC1Q99614 292 aa19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 PPCSQ9HAB8 311 aa19.77■□□□□ 0.75
HERPUD2-201ENST00000311350 NFASCO94856 1347 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 WDR64B1ANS9 1081 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 BAG2O95816 211 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 ESRRAP11474 423 aaPredicted RBP19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 ANPEPP15144 967 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 GRIA2P42262 883 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 KRT76Q01546 638 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 MTMR1Q13613 665 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 GSTA3Q16772 222 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 FAM102BQ5T8I3 360 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 ANKRD13AQ8IZ07 590 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 IL31RAQ8NI17 732 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 CFAP57Q96MR6 1250 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 TTC25Q96NG3 672 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 ARHGEF4Q9NR80 690 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 PDLIM1O00151 329 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 HNRNPCL1O60812 293 aaKnown RBP19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 FAM163BP0C2L3 166 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 CDK7P50613 346 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 NOP14P78316 857 aaKnown RBP19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 CLDN10P78369 228 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 MRPS9P82933 396 aaKnown RBP19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 MDH1BQ5I0G3 518 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 LIN9Q5TKA1 542 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 DRICH1Q6PGQ1 229 aaPredicted RBP19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 MON1BQ7L1V2 547 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 GSTA5Q7RTV2 222 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 SDCCAG8Q86SQ7 713 aaPredicted RBP19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 NCAPG2Q86XI2 1143 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 GPD1LQ8N335 351 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 EXD1Q8NHP7 514 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 SHKBP1Q8TBC3 707 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 HAPLN3Q96S86 360 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 ECSITQ9BQ95 431 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 TMEM120AQ9BXJ8 343 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 EBF3Q9H4W6 596 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 GPRC5CQ9NQ84 441 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 C1orf112Q9NSG2 853 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 SAGE1Q9NXZ1 904 aa19.76■□□□□ 0.75
HERPUD2-201ENST00000311350 ZNFX1Q9P2E3 1918 aaKnown RBP19.75■□□□□ 0.75
HERPUD2-201ENST00000311350 HNRNPRO43390 633 aaKnown RBP19.75■□□□□ 0.75
HERPUD2-201ENST00000311350 OR6B1O95007 311 aa19.75■□□□□ 0.75
HERPUD2-201ENST00000311350 KRT5P13647 590 aa19.75■□□□□ 0.75
HERPUD2-201ENST00000311350 KLRC2P26717 231 aa19.75■□□□□ 0.75
HERPUD2-201ENST00000311350 ARFIP2P53365 341 aa19.75■□□□□ 0.75
HERPUD2-201ENST00000311350 RASA2Q15283 850 aa19.75■□□□□ 0.75
HERPUD2-201ENST00000311350 XKR9Q5GH70 373 aa19.75■□□□□ 0.75
HERPUD2-201ENST00000311350 CFAP157Q5JU67 520 aa19.75■□□□□ 0.75
HERPUD2-201ENST00000311350 SPRYD7Q5W111 196 aa19.75■□□□□ 0.75
HERPUD2-201ENST00000311350 SLC25A41Q8N5S1 370 aa19.75■□□□□ 0.75
HERPUD2-201ENST00000311350 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.75■□□□□ 0.75
HERPUD2-201ENST00000311350 FNBP1Q96RU3 617 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms