RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 SCINQ9Y6U3 715 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 IQANK1A0A1B0GTG1 560 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 CCDC160A6NGH7 325 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 PRR5-ARHGAP8B1AHC4 643 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 TMEM63AO94886 807 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 OR6B1O95007 311 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 ELK3P41970 407 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 ACOT2P49753 483 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 CDK7P50613 346 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 ARHGAP8P85298 464 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 SLC39A4Q6P5W5 647 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 ABRAQ8N0Z2 381 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 EFCAB3Q8N7B9 438 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 POU5F2Q8N7G0 328 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 MZB1Q8WU39 189 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 SSU72Q9NP77 194 aaKnown RBP15.36■□□□□ 0.05
COL6A2-202ENST00000310645 LMCD1Q9NZU5 365 aa15.36■□□□□ 0.05
COL6A2-202ENST00000310645 PMM2O15305 246 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 CST8O60676 142 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 RPL22P35268 128 aaKnown RBP15.35■□□□□ 0.05
COL6A2-202ENST00000310645 SLC25A3Q00325 362 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 BST1Q10588 318 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 AOC3Q16853 763 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 TRMT5Q32P41 509 aaKnown RBP15.35■□□□□ 0.05
COL6A2-202ENST00000310645 TFDP3Q5H9I0 405 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 MARK2Q7KZI7 788 aaKnown RBP15.35■□□□□ 0.05
COL6A2-202ENST00000310645 FAM71DQ8N9W8 422 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 APOPT1Q96IL0 206 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 HOMER2Q9NSB8 354 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 ETNK2Q9NVF9 386 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 hCG_1818297A0A087WSY0 165 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 TRIM49D1C9J1S8 452 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 AVILO75366 819 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 RAP1GDS1P52306 607 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 SP4Q02446 784 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 ASPHQ12797 758 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 CHI3L2Q15782 390 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 PLEKHA7Q6IQ23 1121 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 ZCCHC23Q6ZST2 131 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 NET1Q7Z628 596 aaPredicted RBP15.35■□□□□ 0.05
COL6A2-202ENST00000310645 PPP2R3CQ969Q6 453 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 SRPK1Q96SB4 655 aaKnown RBP15.35■□□□□ 0.05
COL6A2-202ENST00000310645 RIT2Q99578 217 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 PPCSQ9HAB8 311 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 CYP4F11Q9HBI6 524 aa15.35■□□□□ 0.05
COL6A2-202ENST00000310645 MYH9P35579 1960 aaKnown RBP15.35■□□□□ 0.05
COL6A2-202ENST00000310645 TM7SF2O76062 418 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 PGM3O95394 542 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 MAPTP10636 758 aaKnown RBP15.34■□□□□ 0.05
COL6A2-202ENST00000310645 ACTR3P61158 418 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 ZNF200P98182 395 aaPredicted RBP15.34■□□□□ 0.05
COL6A2-202ENST00000310645 DEUP1Q05D60 604 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 DNAJC24Q6P3W2 148 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 HHIPL2Q6UWX4 724 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 ENOSF1Q7L5Y1 443 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 BSNDQ8WZ55 320 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 HIC2Q96JB3 615 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 DRG1Q9Y295 367 aaKnown RBP15.34■□□□□ 0.05
COL6A2-202ENST00000310645 MRPL11Q9Y3B7 192 aaKnown RBP15.34■□□□□ 0.05
COL6A2-202ENST00000310645 SNCAIPQ9Y6H5 919 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 MAGEC1O60732 1142 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 SCNN1BP51168 640 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 OGDHQ02218 1023 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 MED21Q13503 144 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 BMPR2Q13873 1038 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 CYP4A22Q5TCH4 519 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 UNC45BQ8IWX7 931 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 GPD1LQ8N335 351 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.34■□□□□ 0.05
COL6A2-202ENST00000310645 TMC2Q8TDI7 906 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 PREBQ9HCU5 417 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 TAGLN3Q9UI15 199 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 KBTBD13C9JR72 458 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 PDE5AO76074 875 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 SORBS2O94875 1100 aaKnown RBP15.34■□□□□ 0.05
COL6A2-202ENST00000310645 MYCLP12524 364 aaPredicted RBP15.34■□□□□ 0.05
COL6A2-202ENST00000310645 ETV4P43268 484 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 HIRAP54198 1017 aaPredicted RBP15.34■□□□□ 0.05
COL6A2-202ENST00000310645 CIAPIN1Q6FI81 312 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 B3GNT9Q6UX72 402 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 SATL1Q86VE3 508 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 SESTD1Q86VW0 696 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 MFSD14AQ96MC6 490 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 TDRD3Q9H7E2 651 aaKnown RBP15.34■□□□□ 0.05
COL6A2-202ENST00000310645 DDX43Q9NXZ2 648 aaKnown RBP15.34■□□□□ 0.05
COL6A2-202ENST00000310645 STRIP2Q9ULQ0 834 aa15.34■□□□□ 0.05
COL6A2-202ENST00000310645 TCRBV9S1A1TA0A576 114 aa15.33■□□□□ 0.05
COL6A2-202ENST00000310645 F8W8V4 182 aa15.33■□□□□ 0.05
COL6A2-202ENST00000310645 TGDSO95455 350 aa15.33■□□□□ 0.05
COL6A2-202ENST00000310645 C6orf222P0C671 652 aaPredicted RBP15.33■□□□□ 0.05
COL6A2-202ENST00000310645 WNT7BP56706 349 aa15.33■□□□□ 0.05
COL6A2-202ENST00000310645 CCDC142Q17RM4 750 aa15.33■□□□□ 0.05
COL6A2-202ENST00000310645 HSF5Q4G112 596 aaPredicted RBP15.33■□□□□ 0.05
COL6A2-202ENST00000310645 SFT2D3Q587I9 215 aa15.33■□□□□ 0.05
COL6A2-202ENST00000310645 LDHDQ86WU2 507 aa15.33■□□□□ 0.05
COL6A2-202ENST00000310645 ZNF677Q86XU0 584 aa15.33■□□□□ 0.05
COL6A2-202ENST00000310645 MYLK4Q86YV6 388 aaPredicted RBP15.33■□□□□ 0.05
COL6A2-202ENST00000310645 OR6Y1Q8NGX8 325 aa15.33■□□□□ 0.05
COL6A2-202ENST00000310645 DNAJC1Q96KC8 554 aaKnown RBP15.33■□□□□ 0.05
COL6A2-202ENST00000310645 EBF4Q9BQW3 602 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms