RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 SLC4A5Q9BY07 1137 aa22.39■■□□□ 1.17
ATG4D-201ENST00000309469 DNAI2Q9GZS0 605 aa22.39■■□□□ 1.17
ATG4D-201ENST00000309469 ZDHHC18Q9NUE0 388 aa22.39■■□□□ 1.17
ATG4D-201ENST00000309469 PADI3Q9ULW8 664 aa22.39■■□□□ 1.17
ATG4D-201ENST00000309469 R3HDM2Q9Y2K5 976 aaKnown RBP22.39■■□□□ 1.17
ATG4D-201ENST00000309469 TULP2O00295 520 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 CD52P31358 61 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 GBP1P32455 592 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 ACLYP53396 1101 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 SLC25A11Q02978 314 aaKnown RBP22.38■■□□□ 1.17
ATG4D-201ENST00000309469 ACAP1Q15027 740 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 CCNG2Q16589 344 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 HADHQ16836 314 aaKnown RBP22.38■■□□□ 1.17
ATG4D-201ENST00000309469 ODF2Q5BJF6 829 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 SPOCD1Q6ZMY3 1216 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 MRPL10Q7Z7H8 261 aaKnown RBP22.38■■□□□ 1.17
ATG4D-201ENST00000309469 ADGRF2Q8IZF7 708 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 TOP6BLQ8N6T0 577 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 RIN2Q8WYP3 895 aaPredicted RBP22.38■■□□□ 1.17
ATG4D-201ENST00000309469 RAPGEF5Q92565 580 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 LPPQ93052 612 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 TSPYL2Q9H2G4 693 aaPredicted RBP22.38■■□□□ 1.17
ATG4D-201ENST00000309469 VPS18Q9P253 973 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 GIT1Q9Y2X7 761 aa22.38■■□□□ 1.17
ATG4D-201ENST00000309469 FLT3P36888 993 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 RPL21P46778 160 aaKnown RBP22.37■■□□□ 1.17
ATG4D-201ENST00000309469 TMEM110Q86TL2 294 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 PXYLP1Q8TE99 480 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 STK32AQ8WU08 396 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 ZIM3Q96PE6 472 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 ZMYND15Q9H091 742 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 TRMT13Q9NUP7 481 aaKnown RBP22.37■■□□□ 1.17
ATG4D-201ENST00000309469 GRHL1Q9NZI5 618 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 FEZ2Q9UHY8 353 aaPredicted RBP22.37■■□□□ 1.17
ATG4D-201ENST00000309469 NOD1Q9Y239 953 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 FAN1Q9Y2M0 1017 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 THP07101 528 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 KRT7P08729 469 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 GHRP10912 638 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 KRT10P13645 584 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 WARSP23381 471 aaKnown RBP22.37■■□□□ 1.17
ATG4D-201ENST00000309469 PTPN7P35236 360 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 PDE4CQ08493 712 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 PPP1R7Q15435 360 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 ZDHHC24Q6UX98 284 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 PIK3R5Q8WYR1 880 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 ACSF2Q96CM8 615 aaPredicted RBP22.37■■□□□ 1.17
ATG4D-201ENST00000309469 FMO2Q99518 471 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 ASNSD1Q9NWL6 643 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 MIOSQ9NXC5 875 aa22.37■■□□□ 1.17
ATG4D-201ENST00000309469 THSD7BQ9C0I4 1608 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 CYB561D2O14569 222 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 TJP3O95049 919 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 FAM163BP0C2L3 166 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 CCDC130P13994 396 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 GPD1P21695 349 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 IL1R2P27930 398 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 AFF1P51825 1210 aaKnown RBP22.36■■□□□ 1.17
ATG4D-201ENST00000309469 ZNF143P52747 638 aaPredicted RBP22.36■■□□□ 1.17
ATG4D-201ENST00000309469 SNX16P57768 344 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 DMTNQ08495 405 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 LPIN1Q14693 890 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 TRIM71Q2Q1W2 868 aaKnown RBP22.36■■□□□ 1.17
ATG4D-201ENST00000309469 AGMOQ6ZNB7 445 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 SYDE1Q6ZW31 735 aaPredicted RBP22.36■■□□□ 1.17
ATG4D-201ENST00000309469 ANKRD52Q8NB46 1076 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 ATL2Q8NHH9 583 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 GRK7Q8WTQ7 553 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 RUFY1Q96T51 708 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 TRAIPQ9BWF2 469 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 ZWILCHQ9H900 591 aa22.36■■□□□ 1.17
ATG4D-201ENST00000309469 LRRD1A4D1F6 860 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 ARL5CA6NH57 179 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 OPA1O60313 960 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 ZNF623O75123 536 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 RNF40O75150 1001 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 RNF8O76064 485 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 PLTPP55058 493 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 ADCY2Q08462 1091 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 TFDP3Q5H9I0 405 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 FAM26DQ5JW98 314 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 KAZNQ674X7 775 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 OSTM1Q86WC4 334 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 TNIP3Q96KP6 325 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 SH3GL2Q99962 352 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 CNPY3Q9BT09 278 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 C2CD4BA6NLJ0 364 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 MGEA5O60502 916 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 GNRH1P01148 92 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 ADORA2BP29275 332 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 HSD17B3P37058 310 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 CDKN2BP42772 138 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 KRT17Q04695 432 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 BST2Q10589 180 aaKnown RBP22.35■■□□□ 1.17
ATG4D-201ENST00000309469 DSC3Q14574 896 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 OLFML1Q6UWY5 402 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 TMC3Q7Z5M5 1100 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 RXFP2Q8WXD0 754 aa22.35■■□□□ 1.17
ATG4D-201ENST00000309469 PIWIL1Q96J94 861 aaKnown RBP22.35■■□□□ 1.17
ATG4D-201ENST00000309469 hCG_1818297A0A087WSY0 165 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms