RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 PMF1Q6P1K2 205 aa23.66■■□□□ 1.38
PDLIM2-202ENST00000308354 AGMOQ6ZNB7 445 aa23.66■■□□□ 1.38
PDLIM2-202ENST00000308354 TRPV6Q9H1D0 765 aa23.66■■□□□ 1.38
PDLIM2-202ENST00000308354 GDAP2Q9NXN4 497 aa23.66■■□□□ 1.38
PDLIM2-202ENST00000308354 PTPN22Q9Y2R2 807 aa23.66■■□□□ 1.38
PDLIM2-202ENST00000308354 PNPLA4P41247 253 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 PIGHQ14442 188 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 ZNF268Q14587 947 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 CCDC142Q17RM4 750 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 SV2CQ496J9 727 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 FAM102AQ5T9C2 384 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 KATNAL2Q8IYT4 538 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 FMO2Q99518 471 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 FAM118BQ9BPY3 351 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 ZDHHC18Q9NUE0 388 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 ARL5CA6NH57 179 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 GRAP2O75791 330 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 ADORA2BP29275 332 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 COILP38432 576 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 GABRB2P47870 512 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 SCNN1GP51170 649 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 DHX9Q08211 1270 aaKnown RBP23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 OR6B2Q6IFH4 312 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 UNC93AQ86WB7 457 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 CCDC105Q8IYK2 499 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 SH2D3CQ8N5H7 860 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 ARFGAP1Q8N6T3 406 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 PXYLP1Q8TE99 480 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 GLT1D1Q96MS3 346 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 TSPYL2Q9H2G4 693 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 SNX25Q9H3E2 840 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 WDR35Q9P2L0 1181 aa23.65■■□□□ 1.38
PDLIM2-202ENST00000308354 HUS1O60921 280 aa23.64■■□□□ 1.38
PDLIM2-202ENST00000308354 PTK7Q13308 1070 aa23.64■■□□□ 1.38
PDLIM2-202ENST00000308354 FAM183BPQ6ZVS7 135 aa23.64■■□□□ 1.38
PDLIM2-202ENST00000308354 ADGRF2Q8IZF7 708 aa23.64■■□□□ 1.38
PDLIM2-202ENST00000308354 OR2W6PQ8NHA6 318 aa23.64■■□□□ 1.38
PDLIM2-202ENST00000308354 IPO4Q8TEX9 1081 aaKnown RBP23.64■■□□□ 1.38
PDLIM2-202ENST00000308354 ZNF296Q8WUU4 475 aaPredicted RBP23.64■■□□□ 1.38
PDLIM2-202ENST00000308354 UBLCP1Q8WVY7 318 aaPredicted RBP23.64■■□□□ 1.38
PDLIM2-202ENST00000308354 MCRS1Q96EZ8 462 aa23.64■■□□□ 1.38
PDLIM2-202ENST00000308354 TSPAN18Q96SJ8 248 aa23.64■■□□□ 1.38
PDLIM2-202ENST00000308354 CHST7Q9NS84 486 aa23.64■■□□□ 1.38
PDLIM2-202ENST00000308354 R3HDM2Q9Y2K5 976 aaKnown RBP23.64■■□□□ 1.38
PDLIM2-202ENST00000308354 MAP2K2P36507 400 aa23.64■■□□□ 1.37
PDLIM2-202ENST00000308354 TRIM71Q2Q1W2 868 aaKnown RBP23.64■■□□□ 1.37
PDLIM2-202ENST00000308354 PKDCCQ504Y2 493 aa23.64■■□□□ 1.37
PDLIM2-202ENST00000308354 DNAJC21Q5F1R6 531 aaKnown RBP23.64■■□□□ 1.37
PDLIM2-202ENST00000308354 CEP85LQ5SZL2 805 aa23.64■■□□□ 1.37
PDLIM2-202ENST00000308354 LHX8Q68G74 356 aa23.64■■□□□ 1.37
PDLIM2-202ENST00000308354 OSTM1Q86WC4 334 aa23.64■■□□□ 1.37
PDLIM2-202ENST00000308354 C12orf50Q8NA57 414 aaPredicted RBP23.64■■□□□ 1.37
PDLIM2-202ENST00000308354 H0YGN5 161 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 KRT1P04264 644 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 THP07101 528 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 KRT10P13645 584 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 LRPAP1P30533 357 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 RPL21P46778 160 aaKnown RBP23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 CLCNKBP51801 687 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 PLTPP55058 493 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 ADCY2Q08462 1091 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 PDE4CQ08493 712 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 SMTNL2Q2TAL5 461 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 KAZNQ674X7 775 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 EXD1Q8NHP7 514 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 ADAM2Q99965 735 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 PAAF1Q9BRP4 392 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 OSBPL8Q9BZF1 889 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 ZWILCHQ9H900 591 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 GRHL1Q9NZI5 618 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 HESX1Q9UBX0 185 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 NFS1Q9Y697 457 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 CYB561D2O14569 222 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 ATP2C2O75185 946 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 LRCH4O75427 683 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 MYCP01106 439 aaPredicted RBP23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 ACAT1P24752 427 aaKnown RBP23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 STILQ15468 1287 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 TAF5Q15542 800 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 KCNT1Q5JUK3 1230 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 ZDHHC24Q6UX98 284 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 SCUBE3Q8IX30 993 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 HACE1Q8IYU2 909 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 NIPA2Q8N8Q9 360 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 FBXO25Q8TCJ0 367 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 RAPGEF5Q92565 580 aa23.63■■□□□ 1.37
PDLIM2-202ENST00000308354 CASTOR2A6NHX0 329 aa23.62■■□□□ 1.37
PDLIM2-202ENST00000308354 PODXLO00592 558 aa23.62■■□□□ 1.37
PDLIM2-202ENST00000308354 FNTAP49354 379 aa23.62■■□□□ 1.37
PDLIM2-202ENST00000308354 DRG2P55039 364 aaKnown RBP23.62■■□□□ 1.37
PDLIM2-202ENST00000308354 GSCP56915 257 aaPredicted RBP23.62■■□□□ 1.37
PDLIM2-202ENST00000308354 WSCD1Q658N2 575 aa23.62■■□□□ 1.37
PDLIM2-202ENST00000308354 MFSD7Q6UXD7 560 aa23.62■■□□□ 1.37
PDLIM2-202ENST00000308354 SLC35F5Q8WV83 523 aa23.62■■□□□ 1.37
PDLIM2-202ENST00000308354 B3GNT5Q9BYG0 378 aa23.62■■□□□ 1.37
PDLIM2-202ENST00000308354 LRRC19Q9H756 370 aa23.62■■□□□ 1.37
PDLIM2-202ENST00000308354 HMX1Q9NP08 348 aaPredicted RBP23.62■■□□□ 1.37
PDLIM2-202ENST00000308354 GABBR2O75899 941 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 CABYRO75952 493 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 POMCP01189 267 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms