RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 USP20Q9Y2K6 914 aa10.93□□□□□ -0.66
MSRB3-201ENST00000308259 MRPL11Q9Y3B7 192 aaKnown RBP10.93□□□□□ -0.66
MSRB3-201ENST00000308259 DDX3YO15523 660 aaKnown RBP10.93□□□□□ -0.66
MSRB3-201ENST00000308259 EYA4O95677 639 aa10.93□□□□□ -0.66
MSRB3-201ENST00000308259 MYL7Q01449 175 aa10.93□□□□□ -0.66
MSRB3-201ENST00000308259 DUS1LQ6P1R4 473 aaKnown RBP10.93□□□□□ -0.66
MSRB3-201ENST00000308259 FAM160B2Q86V87 743 aa10.93□□□□□ -0.66
MSRB3-201ENST00000308259 GATAD2AQ86YP4 633 aa10.93□□□□□ -0.66
MSRB3-201ENST00000308259 MCF2L2Q86YR7 1114 aa10.93□□□□□ -0.66
MSRB3-201ENST00000308259 GABPB2Q8TAK5 448 aaPredicted RBP10.93□□□□□ -0.66
MSRB3-201ENST00000308259 OLIG1Q8TAK6 271 aa10.93□□□□□ -0.66
MSRB3-201ENST00000308259 SPO11Q9Y5K1 396 aa10.93□□□□□ -0.66
MSRB3-201ENST00000308259 GAS7O60861 476 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 BMP3P12645 472 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 CREB1P16220 341 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 SREBF1P36956 1147 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 PRKCIP41743 596 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 SKIV2L2P42285 1042 aaKnown RBP10.92□□□□□ -0.66
MSRB3-201ENST00000308259 CCNG1P51959 295 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 STAT2P52630 851 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 C21orf59P57076 290 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 PDK3Q15120 406 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 C2CD6Q53TS8 623 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 PLEKHA7Q6IQ23 1121 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 RAVER1Q8IY67 606 aaKnown RBP10.92□□□□□ -0.66
MSRB3-201ENST00000308259 SLC43A3Q8NBI5 491 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 FAM151AQ8WW52 585 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 EBF3Q9H4W6 596 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 PLGRKTQ9HBL7 147 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 TIMMDC1Q9NPL8 285 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 AGPAT3Q9NRZ7 376 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 PRR12Q9ULL5 1215 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 PPP2R3BQ9Y5P8 575 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 FTLP02792 175 aaPredicted RBP10.92□□□□□ -0.66
MSRB3-201ENST00000308259 IL4RP24394 825 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 YWHAGP61981 247 aaKnown RBP eCLIP10.92□□□□□ -0.66
MSRB3-201ENST00000308259 HP1BP3Q5SSJ5 553 aaPredicted RBP10.92□□□□□ -0.66
MSRB3-201ENST00000308259 C10orf76Q5T2E6 689 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 TMEM63BQ5T3F8 832 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 ITPRIPL1Q6GPH6 555 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 LRRC6Q86X45 466 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 CROCCP3Q8IVE0 287 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 ZDHHC14Q8IZN3 488 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 DCLK2Q8N568 766 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 CRYGNQ8WXF5 182 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 COX4I2Q96KJ9 171 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 HEPHQ9BQS7 1158 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 TRIM56Q9BRZ2 755 aaKnown RBP10.92□□□□□ -0.66
MSRB3-201ENST00000308259 MAK16Q9BXY0 300 aaKnown RBP10.92□□□□□ -0.66
MSRB3-201ENST00000308259 SEPT10Q9P0V9 454 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 ALG6Q9Y672 507 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 ANKRD63C9JTQ0 380 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 SPOPO43791 374 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 GJC1P36383 396 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 ADCY8P40145 1251 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 OASLQ15646 514 aaKnown RBP10.92□□□□□ -0.66
MSRB3-201ENST00000308259 EPC2Q52LR7 807 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 EMC10Q5UCC4 262 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 PYDC1Q8WXC3 89 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 RFFLQ8WZ73 363 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 FAM118BQ9BPY3 351 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 ERP44Q9BS26 406 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 BTBD10Q9BSF8 475 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 FBXO28Q9NVF7 368 aa10.92□□□□□ -0.66
MSRB3-201ENST00000308259 EXOC1LA0A1B0GW35 172 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 CNOT3O75175 753 aaKnown RBP10.91□□□□□ -0.66
MSRB3-201ENST00000308259 GM2AP17900 193 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 AP3B2Q13367 1082 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 C1orf186Q6ZWK4 172 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 OTOP1Q7RTM1 612 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 SLFN11Q7Z7L1 901 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 HPS1Q92902 700 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 SNX27Q96L92 541 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 LRGUKQ96M69 825 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 CBWD1Q9BRT8 395 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 MYOZ2Q9NPC6 264 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.91□□□□□ -0.66
MSRB3-201ENST00000308259 EMSYQ7Z589 1322 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 NRAPQ86VF7 1730 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 K7ENM7 598 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 FDX1P10109 184 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 SSTR3P32745 418 aaPredicted RBP10.91□□□□□ -0.66
MSRB3-201ENST00000308259 CHN2P52757 468 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 PPP2R5EQ16537 467 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 FXNQ16595 210 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 JAMLQ86YT9 394 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 GPC2Q8N158 579 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 SLC30A5Q8TAD4 765 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 RNF25Q96BH1 459 aaPredicted RBP10.91□□□□□ -0.66
MSRB3-201ENST00000308259 VPS50Q96JG6 964 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 NSMCE3Q96MG7 304 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 GPATCH1Q9BRR8 931 aaKnown RBP10.91□□□□□ -0.66
MSRB3-201ENST00000308259 LIN28AQ9H9Z2 209 aaKnown RBP10.91□□□□□ -0.66
MSRB3-201ENST00000308259 TAF4O00268 1085 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 PIK3CAP42336 1068 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 HIRAP54198 1017 aaPredicted RBP10.91□□□□□ -0.66
MSRB3-201ENST00000308259 GEMIN4P57678 1058 aaKnown RBP10.91□□□□□ -0.66
MSRB3-201ENST00000308259 ADAM17P78536 824 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 MRPS15P82914 257 aaKnown RBP10.91□□□□□ -0.66
MSRB3-201ENST00000308259 LRP8Q14114 963 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms