RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 VIL1P09327 827 aaKnown RBP16.57■□□□□ 0.24
USP42-201ENST00000306177 PTRHD1Q6GMV3 140 aaKnown RBP16.57■□□□□ 0.24
USP42-201ENST00000306177 FAM117BQ6P1L5 589 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 KIAA0895Q8NCT3 520 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 CMTM5Q96DZ9 223 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 TMA16Q96EY4 203 aaKnown RBP16.57■□□□□ 0.24
USP42-201ENST00000306177 CD274Q9NZQ7 290 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 ARHGAP20Q9P2F6 1191 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 B3GAT3O94766 335 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 FAM107AO95990 144 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 F9P00740 461 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 ATICP31939 592 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 C2CD6Q53TS8 623 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 TBC1D19Q8N5T2 526 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 ZNF507Q8TCN5 953 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 ATG4AQ8WYN0 398 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 ABTB1Q969K4 478 aaPredicted RBP16.57■□□□□ 0.24
USP42-201ENST00000306177 COG4Q9H9E3 785 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 STX18Q9P2W9 335 aaKnown RBP16.57■□□□□ 0.24
USP42-201ENST00000306177 HNRNPCL2B2RXH8 293 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 TRIM49D1C9J1S8 452 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 VTNP04004 478 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 RALBP11234 206 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 ENO3P13929 434 aaPredicted RBP16.57■□□□□ 0.24
USP42-201ENST00000306177 DSG3P32926 999 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 BCAT1P54687 386 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 MCL1Q07820 350 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 CYP3A43Q9HB55 503 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 KCNQ5Q9NR82 932 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 WHRNQ9P202 907 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 SLC39A10Q9ULF5 831 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 RRM1P23921 792 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 C6orf10Q5SRN2 563 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 ILDR1Q86SU0 546 aaPredicted RBP16.57■□□□□ 0.24
USP42-201ENST00000306177 PCYOX1LQ8NBM8 494 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 OLFM3Q96PB7 478 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 SPATC1LQ9H0A9 340 aa16.57■□□□□ 0.24
USP42-201ENST00000306177 LRRIQ3A6PVS8 624 aaPredicted RBP16.56■□□□□ 0.24
USP42-201ENST00000306177 CFAP99D6REC4 459 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 TMED1Q13445 227 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 PTGISQ16647 500 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 CCNJLQ8IV13 435 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 GPR63Q9BZJ6 419 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 LACRTQ9GZZ8 138 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 E2F8A0AVK6 867 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 FAM86B1E9PN63 330 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 PROSCO94903 275 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 FAM86B2P0C5J1 330 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 PLA2G4AP47712 749 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 GEMP55040 296 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 NT5DC1Q5TFE4 455 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 SV2AQ7L0J3 742 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 ADGRF2Q8IZF7 708 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 CISHQ9NSE2 258 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 CYB561D2O14569 222 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 KRT16P08779 473 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 TGFB3P10600 412 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 CHI3L2Q15782 390 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 KCNT1Q5JUK3 1230 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 SLC47A2Q86VL8 602 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 OR9Q1Q8NGQ5 310 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 CEP70Q8NHQ1 597 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 TRAF3IP3Q9Y228 551 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 VWA5AO00534 786 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 CYTH3O43739 400 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 RPLP2P05387 115 aaKnown RBP16.56■□□□□ 0.24
USP42-201ENST00000306177 SEC24CP53992 1094 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 PMS1P54277 932 aaKnown RBP16.56■□□□□ 0.24
USP42-201ENST00000306177 VCPP55072 806 aaKnown RBP16.56■□□□□ 0.24
USP42-201ENST00000306177 FKBP1AP62942 108 aaKnown RBP16.56■□□□□ 0.24
USP42-201ENST00000306177 POTEAQ6S8J7 498 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 ANKS3Q6ZW76 656 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 ZFPM1Q8IX07 1006 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 FAM172AQ8WUF8 416 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 RICTORQ6R327 1708 aa16.56■□□□□ 0.24
USP42-201ENST00000306177 ARHGAP10A1A4S6 786 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 ALDH7A1P49419 539 aaKnown RBP16.55■□□□□ 0.24
USP42-201ENST00000306177 MYL6P60660 151 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 LAMTOR4Q0VGL1 99 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 TMEM119Q4V9L6 283 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 FAXCQ5TGI0 409 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 MEI1Q5TIA1 1274 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 SLC30A10Q6XR72 485 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 RRM2BQ7LG56 351 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 LRRC6Q86X45 466 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 EXD1Q8NHP7 514 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 CPB2Q96IY4 423 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 PNMA5Q96PV4 448 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 CINPQ9BW66 212 aaPredicted RBP16.55■□□□□ 0.24
USP42-201ENST00000306177 SRP72O76094 671 aaKnown RBP16.55■□□□□ 0.24
USP42-201ENST00000306177 DDNO94850 711 aaPredicted RBP16.55■□□□□ 0.24
USP42-201ENST00000306177 SARSP49591 514 aaKnown RBP16.55■□□□□ 0.24
USP42-201ENST00000306177 CLEC16AQ2KHT3 1053 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 NIPA1Q7RTP0 329 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 SLC20A1Q8WUM9 679 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 TMEM176AQ96HP8 235 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 OSGEPQ9NPF4 335 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 VPS9D1Q9Y2B5 631 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 APOA4P06727 396 aa16.55■□□□□ 0.24
USP42-201ENST00000306177 SLC11A2P49281 568 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms