RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 C1orf54Q8WWF1 131 aa23.48■■□□□ 1.35
SMAD1-201ENST00000302085 PTCH2Q9Y6C5 1203 aa23.48■■□□□ 1.35
SMAD1-201ENST00000302085 PI4K2BG5E9Z4 385 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 CAND2O75155 1236 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 ADORA2BP29275 332 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 CLCNKBP51801 687 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 PRMT2P55345 433 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 KLF1Q13351 362 aaPredicted RBP23.47■■□□□ 1.35
SMAD1-201ENST00000302085 NNTQ13423 1086 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 WSCD1Q658N2 575 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 DUPD1Q68J44 220 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 ANKRD52Q8NB46 1076 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 MAIP1Q8WWC4 291 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 PIWIL1Q96J94 861 aaKnown RBP23.47■■□□□ 1.35
SMAD1-201ENST00000302085 ERP44Q9BS26 406 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 OSBPL8Q9BZF1 889 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 MIS12Q9H081 205 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 PODXLO00592 558 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 LRCH4O75427 683 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 KCNJ1P48048 391 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 TRNP1Q6NT89 227 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 STK32AQ8WU08 396 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.47■■□□□ 1.35
SMAD1-201ENST00000302085 SENP8Q96LD8 212 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 SLITRK1Q96PX8 696 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 NEUROG2Q9H2A3 272 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 DPH5Q9H2P9 285 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 RSAD1Q9HA92 442 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 STARD7Q9NQZ5 370 aa23.47■■□□□ 1.35
SMAD1-201ENST00000302085 GABRDO14764 452 aa23.46■■□□□ 1.35
SMAD1-201ENST00000302085 ATP2C2O75185 946 aa23.46■■□□□ 1.35
SMAD1-201ENST00000302085 KRT1P04264 644 aa23.46■■□□□ 1.35
SMAD1-201ENST00000302085 IBSPP21815 317 aaPredicted RBP23.46■■□□□ 1.35
SMAD1-201ENST00000302085 HLTFQ14527 1009 aaKnown RBP eCLIP23.46■■□□□ 1.35
SMAD1-201ENST00000302085 TSEN2Q8NCE0 465 aaKnown RBP23.46■■□□□ 1.35
SMAD1-201ENST00000302085 RAPGEF5Q92565 580 aa23.46■■□□□ 1.35
SMAD1-201ENST00000302085 TRIM31Q9BZY9 425 aa23.46■■□□□ 1.35
SMAD1-201ENST00000302085 RAB17Q9H0T7 212 aa23.46■■□□□ 1.35
SMAD1-201ENST00000302085 CHST7Q9NS84 486 aa23.46■■□□□ 1.35
SMAD1-201ENST00000302085 R3HDM2Q9Y2K5 976 aaKnown RBP23.46■■□□□ 1.35
SMAD1-201ENST00000302085 FNTAP49354 379 aa23.45■■□□□ 1.35
SMAD1-201ENST00000302085 SLC25A11Q02978 314 aaKnown RBP23.45■■□□□ 1.35
SMAD1-201ENST00000302085 MBTPS1Q14703 1052 aa23.45■■□□□ 1.35
SMAD1-201ENST00000302085 MFSD7Q6UXD7 560 aa23.45■■□□□ 1.35
SMAD1-201ENST00000302085 C3orf58Q8NDZ4 430 aa23.45■■□□□ 1.35
SMAD1-201ENST00000302085 SLC2A14Q8TDB8 520 aa23.45■■□□□ 1.35
SMAD1-201ENST00000302085 KHSRPQ92945 711 aaKnown RBP eCLIP23.45■■□□□ 1.35
SMAD1-201ENST00000302085 ACSF2Q96CM8 615 aaPredicted RBP23.45■■□□□ 1.35
SMAD1-201ENST00000302085 RBM41Q96IZ5 413 aaKnown RBP23.45■■□□□ 1.35
SMAD1-201ENST00000302085 PAAF1Q9BRP4 392 aa23.45■■□□□ 1.35
SMAD1-201ENST00000302085 DCLK3Q9C098 648 aa23.45■■□□□ 1.35
SMAD1-201ENST00000302085 FAM114A2Q9NRY5 505 aa23.45■■□□□ 1.35
SMAD1-201ENST00000302085 PHF24Q9UPV7 400 aa23.45■■□□□ 1.35
SMAD1-201ENST00000302085 H3BQF6 201 aa23.45■■□□□ 1.34
SMAD1-201ENST00000302085 IL1R2P27930 398 aa23.45■■□□□ 1.34
SMAD1-201ENST00000302085 RPL9P32969 192 aaKnown RBP23.45■■□□□ 1.34
SMAD1-201ENST00000302085 BST2Q10589 180 aaKnown RBP23.45■■□□□ 1.34
SMAD1-201ENST00000302085 OLFML1Q6UWY5 402 aa23.45■■□□□ 1.34
SMAD1-201ENST00000302085 RTN4RL1Q86UN2 441 aaPredicted RBP23.45■■□□□ 1.34
SMAD1-201ENST00000302085 SCUBE3Q8IX30 993 aa23.45■■□□□ 1.34
SMAD1-201ENST00000302085 CCDC105Q8IYK2 499 aa23.45■■□□□ 1.34
SMAD1-201ENST00000302085 ATG4AQ8WYN0 398 aa23.45■■□□□ 1.34
SMAD1-201ENST00000302085 TNIP3Q96KP6 325 aa23.45■■□□□ 1.34
SMAD1-201ENST00000302085 RUNDC3BQ96NL0 473 aa23.45■■□□□ 1.34
SMAD1-201ENST00000302085 SAGE1Q9NXZ1 904 aa23.45■■□□□ 1.34
SMAD1-201ENST00000302085 DDX56Q9NY93 547 aaKnown RBP23.45■■□□□ 1.34
SMAD1-201ENST00000302085 CASTOR2A6NHX0 329 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 C2CD4BA6NLJ0 364 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 TKTP29401 623 aaKnown RBP23.44■■□□□ 1.34
SMAD1-201ENST00000302085 ZNF143P52747 638 aaPredicted RBP23.44■■□□□ 1.34
SMAD1-201ENST00000302085 SNX1Q13596 522 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 TAF5Q15542 800 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 UPP1Q16831 310 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 ZFYVE27Q5T4F4 411 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 SPOCD1Q6ZMY3 1216 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 POLNQ7Z5Q5 900 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 ZNF598Q86UK7 904 aaKnown RBP23.44■■□□□ 1.34
SMAD1-201ENST00000302085 ECHDC2Q86YB7 292 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 B3GALNT2Q8NCR0 500 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 SH3TC2Q8TF17 1288 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 RXFP2Q8WXD0 754 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 PGBD4Q96DM1 585 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 DNAI2Q9GZS0 605 aa23.44■■□□□ 1.34
SMAD1-201ENST00000302085 ARVCFO00192 962 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 PAPSS1O43252 624 aaPredicted RBP23.43■■□□□ 1.34
SMAD1-201ENST00000302085 GRAP2O75791 330 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 POMCP01189 267 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 KRT10P13645 584 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 PTPN1P18031 435 aaKnown RBP23.43■■□□□ 1.34
SMAD1-201ENST00000302085 GPD1P21695 349 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 ACAT1P24752 427 aaKnown RBP23.43■■□□□ 1.34
SMAD1-201ENST00000302085 RPL34P49207 117 aaKnown RBP23.43■■□□□ 1.34
SMAD1-201ENST00000302085 BCAT1P54687 386 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 SLC6A3Q01959 620 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 ADCY2Q08462 1091 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 ACAP1Q15027 740 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 CCDC142Q17RM4 750 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 KIAA0319Q5VV43 1072 aa23.43■■□□□ 1.34
SMAD1-201ENST00000302085 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.43■■□□□ 1.34
SMAD1-201ENST00000302085 ZWILCHQ9H900 591 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms