RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 C16orf87Q6PH81 154 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 GTF3C2Q8WUA4 911 aaPredicted RBP20.09■□□□□ 0.81
TSR1-201ENST00000301364 TNFRSF25Q93038 417 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 DTNBP1Q96EV8 351 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 EIF2AQ9BY44 585 aaKnown RBP20.09■□□□□ 0.81
TSR1-201ENST00000301364 DDX4Q9NQI0 724 aaKnown RBP20.09■□□□□ 0.81
TSR1-201ENST00000301364 CYP3A7-CYP3A51PA0A087WV96 503 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 CYP3A7P24462 503 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 CYTH1Q15438 398 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 CBWD6Q4V339 395 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 CBWD3Q5JTY5 395 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 CBWD5Q5RIA9 395 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 CYP3A43Q9HB55 503 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 DPP3Q9NY33 737 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 MAGEA13PA6NCF6 341 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 PCSK1P29120 753 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 IFI35P80217 286 aaPredicted RBP20.08■□□□□ 0.81
TSR1-201ENST00000301364 BIRC2Q13490 618 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 FAXCQ5TGI0 409 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 LINC00523Q86TU6 105 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 SLC7A14Q8TBB6 771 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 RMDN1Q96DB5 314 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 EGFL8Q99944 293 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 USP18Q9UMW8 372 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 GAKO14976 1311 aa20.08■□□□□ 0.81
TSR1-201ENST00000301364 SDR42E2A6NKP2 422 aa20.08■□□□□ 0.8
TSR1-201ENST00000301364 DCAF4L1Q3SXM0 396 aa20.08■□□□□ 0.8
TSR1-201ENST00000301364 C1orf186Q6ZWK4 172 aa20.08■□□□□ 0.8
TSR1-201ENST00000301364 GLIS3Q8NEA6 775 aa20.08■□□□□ 0.8
TSR1-201ENST00000301364 BEGAINQ9BUH8 593 aa20.08■□□□□ 0.8
TSR1-201ENST00000301364 ILKAPQ9H0C8 392 aaPredicted RBP20.08■□□□□ 0.8
TSR1-201ENST00000301364 SMIM22K7EJ46 135 aa20.08■□□□□ 0.8
TSR1-201ENST00000301364 BACE1P56817 501 aa20.08■□□□□ 0.8
TSR1-201ENST00000301364 SPATA2LQ8IUW3 424 aaPredicted RBP20.08■□□□□ 0.8
TSR1-201ENST00000301364 MKL1Q969V6 931 aa20.08■□□□□ 0.8
TSR1-201ENST00000301364 NOTUMQ6P988 496 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 SH3TC2Q8TF17 1288 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 ZNF606Q8WXB4 792 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 ASPSCR1Q9BZE9 553 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 DNAJC18Q9H819 358 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 STX18Q9P2W9 335 aaKnown RBP20.07■□□□□ 0.8
TSR1-201ENST00000301364 UBQLN1Q9UMX0 589 aaKnown RBP20.07■□□□□ 0.8
TSR1-201ENST00000301364 ENO4A6NNW6 628 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 KCNA2P16389 499 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 MMP14P50281 582 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 MTDHQ86UE4 582 aaKnown RBP20.07■□□□□ 0.8
TSR1-201ENST00000301364 REXO2Q9Y3B8 237 aaKnown RBP20.07■□□□□ 0.8
TSR1-201ENST00000301364 RPS6KL1Q9Y6S9 549 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 RRN3P2A6NIE6 340 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 BNIP3LO60238 219 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 HDAC4P56524 1084 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 PTK6Q13882 451 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 CAPRIN1Q14444 709 aaKnown RBP20.07■□□□□ 0.8
TSR1-201ENST00000301364 USP33Q8TEY7 942 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 GCNAQ96QF7 691 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 CATSPERBQ9H7T0 1116 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 NINJ2Q9NZG7 142 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 TJP2Q9UDY2 1190 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 ZBTB24O43167 697 aaPredicted RBP20.07■□□□□ 0.8
TSR1-201ENST00000301364 DRG2P55039 364 aaKnown RBP20.07■□□□□ 0.8
TSR1-201ENST00000301364 MYL6P60660 151 aa20.07■□□□□ 0.8
TSR1-201ENST00000301364 NOP9Q86U38 636 aaKnown RBP20.07■□□□□ 0.8
TSR1-201ENST00000301364 CDR2LQ86X02 465 aaPredicted RBP20.06■□□□□ 0.8
TSR1-201ENST00000301364 PKD2L2Q9NZM6 624 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 MYBL2P10244 700 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 TAF6P49848 677 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 GMPSP49915 693 aaPredicted RBP20.06■□□□□ 0.8
TSR1-201ENST00000301364 PGM5Q15124 567 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 FAM83AQ86UY5 434 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 PACS2Q86VP3 889 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 SLC4A9Q96Q91 983 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 HACD3Q9P035 362 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 SLC39A10Q9ULF5 831 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 SLIT3O75094 1523 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 TRPC5OSA6NMA1 111 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 ATICP31939 592 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 ITGB3BPQ13352 177 aaPredicted RBP20.06■□□□□ 0.8
TSR1-201ENST00000301364 KDELC2Q7Z4H8 507 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 KATNAL1Q9BW62 490 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 GGA3Q9NZ52 723 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 TLR2O60603 784 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 H2AFYO75367 372 aaKnown RBP20.06■□□□□ 0.8
TSR1-201ENST00000301364 SRP72O76094 671 aaKnown RBP20.06■□□□□ 0.8
TSR1-201ENST00000301364 GRIK1P39086 918 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 RECQLP46063 649 aaPredicted RBP20.06■□□□□ 0.8
TSR1-201ENST00000301364 PTPN11Q06124 597 aaPredicted RBP20.06■□□□□ 0.8
TSR1-201ENST00000301364 PDAP1Q13442 181 aaKnown RBP20.06■□□□□ 0.8
TSR1-201ENST00000301364 IRF2BP1Q8IU81 584 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 MAP4K3Q8IVH8 894 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 C4orf32Q8N8J7 132 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 SNX19Q92543 992 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 TRIM54Q9BYV2 358 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.06■□□□□ 0.8
TSR1-201ENST00000301364 KRT16P08779 473 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 RHBDL3P58872 404 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 DSG1Q02413 1049 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 ZNF484Q5JVG2 852 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 APOBEC3HQ6NTF7 200 aaKnown RBP20.06■□□□□ 0.8
TSR1-201ENST00000301364 SCUBE1Q8IWY4 988 aa20.06■□□□□ 0.8
TSR1-201ENST00000301364 GRK2P25098 689 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms