RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 SH3PXD2AQ5TCZ1 1133 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 CENPUQ71F23 418 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 UNC45BQ8IWX7 931 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 C1orf127Q8N9H9 656 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 OTUD5Q96G74 571 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 TRIM6Q9C030 488 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-204ENST00000300862 CDT1Q9H211 546 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 PCDH9Q9HC56 1237 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 SLC24A3Q9HC58 644 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 TXNRD2Q9NNW7 524 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 DDX56Q9NY93 547 aaKnown RBP13.54□□□□□ -0.24
HIF3A-204ENST00000300862 STK38LQ9Y2H1 464 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 CLUHO75153 1309 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 CFAP73A6NFT4 308 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 SIGLEC16A6NMB1 481 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 A8MUI8 341 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 GPR25O00155 361 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 SKAP2O75563 359 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-204ENST00000300862 ASMTLO95671 621 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 CA4P22748 312 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 YWHAEP62258 255 aaKnown RBP13.54□□□□□ -0.24
HIF3A-204ENST00000300862 MMRN1Q13201 1228 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 GRM1Q13255 1194 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 ZNF268Q14587 947 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-204ENST00000300862 MTFR1Q15390 333 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 GJC2Q5T442 439 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-204ENST00000300862 EFCAB12Q6NXP0 572 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 NIPA2Q8N8Q9 360 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 FAM71DQ8N9W8 422 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 UBA3Q8TBC4 463 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 CPT1BQ92523 772 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 RSRC1Q96IZ7 334 aaKnown RBP13.54□□□□□ -0.24
HIF3A-204ENST00000300862 KLF6Q99612 283 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-204ENST00000300862 WDR83Q9BRX9 315 aaKnown RBP13.54□□□□□ -0.24
HIF3A-204ENST00000300862 CALN1Q9BXU9 219 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 MAK16Q9BXY0 300 aaKnown RBP13.54□□□□□ -0.24
HIF3A-204ENST00000300862 FOXP3Q9BZS1 431 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 PTPRHQ9HD43 1115 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 PDGFCQ9NRA1 345 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 EVPLQ92817 2033 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 GOLGA8RI6L899 631 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 ACKR2O00590 384 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 ANP32DO95626 131 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 ITGB3P05106 788 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 TGFB3P10600 412 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 ALADP13716 330 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 KDELR1P24390 212 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 RPL22P35268 128 aaKnown RBP13.53□□□□□ -0.24
HIF3A-204ENST00000300862 BNIP1Q12981 228 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 Q3C1V9 767 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 ZNF667Q5HYK9 610 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 TSHZ1Q6ZSZ6 1077 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 MOB2Q70IA6 237 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 RFX6Q8HWS3 928 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 KCTD6Q8NC69 237 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 RSAD2Q8WXG1 361 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 KLHL29Q96CT2 875 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 FGD4Q96M96 766 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 TTC25Q96NG3 672 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 SMC6Q96SB8 1091 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 ELOVL4Q9GZR5 314 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 ELP3Q9H9T3 547 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 RPF1Q9H9Y2 349 aaKnown RBP13.53□□□□□ -0.24
HIF3A-204ENST00000300862 KLHL14Q9P2G3 628 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 ACTL7BQ9Y614 415 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 MGAMO43451 1857 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 WDR91A4D1P6 747 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 LACTBL1A8MY62 500 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 ADM5C9JUS6 153 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 KRT16P08779 473 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 NQO1P15559 274 aaKnown RBP13.53□□□□□ -0.24
HIF3A-204ENST00000300862 PROZP22891 400 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 MIPP30301 263 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 TAP1Q03518 808 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 CCDC142Q17RM4 750 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 CELF3Q5SZQ8 465 aaKnown RBP13.53□□□□□ -0.24
HIF3A-204ENST00000300862 NPNTQ6UXI9 565 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 XYLT1Q86Y38 959 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 DENND1AQ8TEH3 1009 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 PYROXD1Q8WU10 500 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 CLMNQ96JQ2 1002 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 FAM167AQ96KS9 214 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 ZNF570Q96NI8 536 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 ASCC2Q9H1I8 757 aaPredicted RBP13.53□□□□□ -0.24
HIF3A-204ENST00000300862 RNPEPQ9H4A4 650 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 SHOC2Q9UQ13 582 aa13.53□□□□□ -0.24
HIF3A-204ENST00000300862 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
HIF3A-204ENST00000300862 IGKV6-21A0A0C4DH24 114 aa13.52□□□□□ -0.24
HIF3A-204ENST00000300862 B4GALT4O60513 344 aa13.52□□□□□ -0.24
HIF3A-204ENST00000300862 GRAP2O75791 330 aa13.52□□□□□ -0.24
HIF3A-204ENST00000300862 TMEM63AO94886 807 aa13.52□□□□□ -0.24
HIF3A-204ENST00000300862 FGFR1P11362 822 aa13.52□□□□□ -0.24
HIF3A-204ENST00000300862 KRT4P19013 534 aa13.52□□□□□ -0.24
HIF3A-204ENST00000300862 POLR2BP30876 1174 aaKnown RBP13.52□□□□□ -0.24
HIF3A-204ENST00000300862 BBS9Q3SYG4 887 aa13.52□□□□□ -0.24
HIF3A-204ENST00000300862 JADE1Q6IE81 842 aa13.52□□□□□ -0.24
HIF3A-204ENST00000300862 C3orf62Q6ZUJ4 267 aa13.52□□□□□ -0.24
HIF3A-204ENST00000300862 ZC3H18Q86VM9 953 aaKnown RBP13.52□□□□□ -0.24
HIF3A-204ENST00000300862 RIBC1Q8N443 379 aaPredicted RBP13.52□□□□□ -0.24
HIF3A-204ENST00000300862 SLC4A11Q8NBS3 891 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms