RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 USP46P62068 366 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 MMEL1Q495T6 779 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 RABGAP1LQ5R372 815 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 MON1BQ7L1V2 547 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 IGDCC3Q8IVU1 814 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 SNRNP27Q8WVK2 155 aaKnown RBP15.34■□□□□ 0.05
COL6A2-201ENST00000300527 CDCA7Q9BWT1 371 aaPredicted RBP15.34■□□□□ 0.05
COL6A2-201ENST00000300527 CALN1Q9BXU9 219 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 FOXP3Q9BZS1 431 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 PHACTR1Q9C0D0 580 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 TDRD3Q9H7E2 651 aaKnown RBP15.34■□□□□ 0.05
COL6A2-201ENST00000300527 AVENQ9NQS1 362 aaPredicted RBP15.34■□□□□ 0.05
COL6A2-201ENST00000300527 GALNT8Q9NY28 637 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 TMEM63AO94886 807 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 SERPINB2P05120 415 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 CYP24A1Q07973 514 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 TCHHL1Q5QJ38 904 aaPredicted RBP15.34■□□□□ 0.05
COL6A2-201ENST00000300527 SCARA5Q6ZMJ2 495 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 MARK2Q7KZI7 788 aaKnown RBP15.34■□□□□ 0.05
COL6A2-201ENST00000300527 DPH6Q7L8W6 267 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 RFX6Q8HWS3 928 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 CPT1BQ92523 772 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 SRPK1Q96SB4 655 aaKnown RBP15.34■□□□□ 0.05
COL6A2-201ENST00000300527 EBF4Q9BQW3 602 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 FAM192AQ9GZU8 254 aa15.34■□□□□ 0.05
COL6A2-201ENST00000300527 RALGPS1Q5JS13 557 aa15.33■□□□□ 0.05
COL6A2-201ENST00000300527 NUDCD3Q8IVD9 361 aa15.33■□□□□ 0.05
COL6A2-201ENST00000300527 ZNF398Q8TD17 642 aa15.33■□□□□ 0.05
COL6A2-201ENST00000300527 HSPH1Q92598 858 aa15.33■□□□□ 0.05
COL6A2-201ENST00000300527 TM9SF1O15321 606 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 RPL22P35268 128 aaKnown RBP15.33■□□□□ 0.04
COL6A2-201ENST00000300527 ZNF200P98182 395 aaPredicted RBP15.33■□□□□ 0.04
COL6A2-201ENST00000300527 SFT2D3Q587I9 215 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 SH3BP5LQ7L8J4 393 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 USP37Q86T82 979 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 PPIL6Q8IXY8 311 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.33■□□□□ 0.04
COL6A2-201ENST00000300527 PIP4K2CQ8TBX8 421 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 DCAKDQ8WVC6 231 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 PHF12Q96QT6 1004 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 MMP19Q99542 508 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 STRA6Q9BX79 667 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 KCND2Q9NZV8 630 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 SHOC2Q9UQ13 582 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 WEE2P0C1S8 567 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 PEX2P28328 305 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 CDK7P50613 346 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 AQP4P55087 323 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 NCOA4Q13772 614 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 MYBPC2Q14324 1141 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 UNC45BQ8IWX7 931 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 AGBL1Q96MI9 1066 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 TRIM56Q9BRZ2 755 aaKnown RBP15.33■□□□□ 0.04
COL6A2-201ENST00000300527 ACSS3Q9H6R3 686 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 IP6K2Q9UHH9 426 aa15.33■□□□□ 0.04
COL6A2-201ENST00000300527 TESPA1A2RU30 521 aaPredicted RBP15.32■□□□□ 0.04
COL6A2-201ENST00000300527 NOMO3P69849 1222 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 TMED1Q13445 227 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 MAP7Q14244 749 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 HIC1Q14526 733 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 ADGRD1Q6QNK2 874 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 DENND5BQ6ZUT9 1274 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 RELL1Q8IUW5 271 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 OR6Y1Q8NGX8 325 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 E2F7Q96AV8 911 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 GCNAQ96QF7 691 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 ARHGEF4Q9NR80 690 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 PARVAQ9NVD7 372 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 MAD1L1Q9Y6D9 718 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 MAST2Q6P0Q8 1798 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 CNTNAP4Q9C0A0 1308 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 A8MXQ7 604 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 DLG1Q12959 904 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 PRKD1Q15139 912 aaPredicted RBP15.32■□□□□ 0.04
COL6A2-201ENST00000300527 ARHGAP18Q8N392 663 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 CEP70Q8NHQ1 597 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 BSNDQ8WZ55 320 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 PPP2R3CQ969Q6 453 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 APOPT1Q96IL0 206 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 CSRNP1Q96S65 589 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 IWS1Q96ST2 819 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 PCDH9Q9HC56 1237 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 TAGLN3Q9UI15 199 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 SCINQ9Y6U3 715 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 STRCP1A6NGW2 1772 aa15.32■□□□□ 0.04
COL6A2-201ENST00000300527 MYOCOSA0A1B0GUC4 107 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 TRPA1O75762 1119 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 LIG4P49917 911 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 GTF2BQ00403 316 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 OGDHQ02218 1023 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 TRMT5Q32P41 509 aaKnown RBP15.31■□□□□ 0.04
COL6A2-201ENST00000300527 TFDP3Q5H9I0 405 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 MROH9Q5TGP6 573 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 SCARA3Q6AZY7 606 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.31■□□□□ 0.04
COL6A2-201ENST00000300527 CRLF3Q8IUI8 442 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 ZNF276Q8N554 614 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 EMC1Q8N766 993 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 ZNF516Q92618 1163 aa15.31■□□□□ 0.04
COL6A2-201ENST00000300527 CEP170P1Q96L14 293 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms