RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 ZFYVE19Q96K21 471 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 PDCD2LQ9BRP1 358 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 NMRK1Q9NWW6 199 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 LIMA1Q9UHB6 759 aaKnown RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 LNPEPQ9UIQ6 1025 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 CHUKO15111 745 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 MYL2P10916 166 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 FGFR4P22455 802 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 AKAP5P24588 427 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 FKBP1AP62942 108 aaKnown RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 FBXO47Q5MNV8 452 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 LLGL2Q6P1M3 1020 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 COG1Q8WTW3 980 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 UBE2Q2Q8WVN8 375 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 ZNF558Q96NG5 402 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 PRPF18Q99633 342 aaKnown RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 AGPAT3Q9NRZ7 376 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 ITGA11Q9UKX5 1188 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 DYRK1BQ9Y463 629 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 SNX5Q9Y5X3 404 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 IFRD1O00458 451 aaPredicted RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 HLA-DPA1P20036 260 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 RFX5P48382 616 aaPredicted RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 EPC2Q52LR7 807 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 SLC45A4Q5BKX6 768 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 SLFN11Q7Z7L1 901 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 WDR49Q8IV35 697 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 B4GALNT2Q8NHY0 566 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 PNKPQ96T60 521 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 GOLPH3Q9H4A6 298 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 DCTN4Q9UJW0 460 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 DBR1Q9UK59 544 aaKnown RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 GTPBP10A4D1E9 387 aaKnown RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 TSPAN3O60637 253 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 PHF2O75151 1096 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 RTN3O95197 1032 aaPredicted RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 CHGBP05060 677 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 NCKAP1LP55160 1127 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 ANTXR2P58335 489 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 MTA1Q13330 715 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 STAT4Q14765 748 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 CASP8Q14790 479 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 SLC18A3Q16572 532 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 BOLA3Q53S33 107 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 CCDC149Q6ZUS6 474 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 METTL16Q86W50 562 aaKnown RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 PDGFDQ9GZP0 370 aaPredicted RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 SENP2Q9HC62 589 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 UTP6Q9NYH9 597 aaKnown RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 SPG21Q9NZD8 308 aa7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 AAR2Q9Y312 384 aaKnown RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 TIMM13Q9Y5L4 95 aaPredicted RBP7.2□□□□□ -1.26
GAPVD1-202ENST00000297933 MST1RQ04912 1400 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 RNF103-CHMP3A0A140T963 221 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 SOAT2O75908 522 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 HAUS5O94927 633 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 ITGALP20701 1170 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 FGFR2P21802 821 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 NDUFV1P49821 464 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 POU4F1Q01851 419 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 BYSLQ13895 437 aaKnown RBP7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 FLOT2Q14254 428 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 NBPF20Q3BBV1 942 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 C6orf10Q5SRN2 563 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 KHDRBS2Q5VWX1 349 aaKnown RBP7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 SLC27A1Q6PCB7 646 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 NECAB2Q7Z6G3 386 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 ZNF410Q86VK4 478 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 PGLYRP2Q96PD5 576 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 SYT15Q9BQS2 421 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 ADGRE3Q9BY15 652 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 ZCWPW1Q9H0M4 648 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 TAF1DQ9H5J8 278 aaPredicted RBP7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 SYTL2Q9HCH5 934 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 MLXIPLQ9NP71 852 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 CST8O60676 142 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 MLNP12872 115 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 FDFT1P37268 417 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 TUFMP49411 452 aaKnown RBP7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 NUMBP49757 651 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 CCL23P55773 120 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 STK4Q13043 487 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 TRIM65Q6PJ69 517 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 SLC30A10Q6XR72 485 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 C4orf19Q8IY42 314 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 C10orf53Q8N6V4 93 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 VPS37AQ8NEZ2 397 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 ARL8AQ96BM9 186 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 RRAGDQ9NQL2 400 aaPredicted RBP7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 MEGF6O75095 1541 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 KDM4FA0A1W2PPD8 638 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 SLC15A5A6NIM6 579 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 ATMINO43313 823 aaPredicted RBP7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 TLL1O43897 1013 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 CSDE1O75534 798 aaKnown RBP7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 SLC9A1P19634 815 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 RFX3P48380 749 aa7.19□□□□□ -1.26
GAPVD1-202ENST00000297933 RENBPP51606 427 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms