RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 TRAPPC9Q96Q05 1148 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 FNBP1Q96RU3 617 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 EPB41L4BQ9H329 900 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 NUB1Q9Y5A7 615 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 COQ9O75208 318 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 SUN1O94901 812 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 HLA-DRAP01903 254 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 HSPA8P11142 646 aaKnown RBP7.02□□□□□ -1.29
TMC1-201ENST00000297784 CKBP12277 381 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 AKAP5P24588 427 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 CDC25CP30307 473 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 GBP1P32455 592 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 GRM5P41594 1212 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 AFF1P51825 1210 aaKnown RBP7.02□□□□□ -1.29
TMC1-201ENST00000297784 POU5F1Q01860 360 aaKnown RBP7.02□□□□□ -1.29
TMC1-201ENST00000297784 DYNC1I2Q13409 638 aaKnown RBP7.02□□□□□ -1.29
TMC1-201ENST00000297784 ZBTB6Q15916 424 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 FAM26DQ5JW98 314 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 SFMBT2Q5VUG0 894 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 NOTUMQ6P988 496 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 ARHGAP22Q7Z5H3 698 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 DDX42Q86XP3 938 aaKnown RBP eCLIP7.02□□□□□ -1.29
TMC1-201ENST00000297784 C1orf127Q8N9H9 656 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 GSTCDQ8NEC7 633 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 ATL2Q8NHH9 583 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 PRCCQ92733 491 aaPredicted RBP7.02□□□□□ -1.29
TMC1-201ENST00000297784 VTI1AQ96AJ9 217 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 ZNF333Q96JL9 665 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 RAB3IPQ96QF0 476 aaPredicted RBP7.02□□□□□ -1.29
TMC1-201ENST00000297784 CRISPLD2Q9H0B8 497 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 RNF208Q9H0X6 261 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 RXFP1Q9HBX9 757 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 STARD7Q9NQZ5 370 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 INTS9Q9NV88 658 aaKnown RBP7.02□□□□□ -1.29
TMC1-201ENST00000297784 TTC7AQ9ULT0 858 aaPredicted RBP7.02□□□□□ -1.29
TMC1-201ENST00000297784 NENFQ9UMX5 172 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 PIN4Q9Y237 131 aaKnown RBP7.02□□□□□ -1.29
TMC1-201ENST00000297784 TRPV2Q9Y5S1 764 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 MROH7Q68CQ1 1323 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 REV3LO60673 3130 aa7.02□□□□□ -1.29
TMC1-201ENST00000297784 CHD7Q9P2D1 2997 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 ARVCFO00192 962 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 DAPK3O43293 454 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 CD4P01730 458 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 SOX5P35711 763 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 PRKCIP41743 596 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 MXRA7P84157 204 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 PTPN11Q06124 597 aaPredicted RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 LPIN1Q14693 890 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 PPP2R5EQ16537 467 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 ARHGAP44Q17R89 818 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 FBXO47Q5MNV8 452 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 C6orf118Q5T5N4 469 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 NUGGCQ68CJ6 796 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 SPATA21Q7Z572 469 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 DNAAF5Q86Y56 855 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 FAM126BQ8IXS8 530 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 ENDOVQ8N8Q3 282 aaKnown RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 LRRC57Q8N9N7 239 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 IFT43Q96FT9 208 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 STMN4Q9H169 189 aaPredicted RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 PABPC3Q9H361 631 aaKnown RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 RPF1Q9H9Y2 349 aaKnown RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 RPL26L1Q9UNX3 145 aaKnown RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 A0A087X0T9 212 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 KCNK3O14649 394 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 GFPT2O94808 682 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 CALCAP01258 141 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 FAM228BP0C875 321 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 ACO1P21399 889 aaKnown RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 CALB2P22676 271 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 IGFBP6P24592 240 aaPredicted RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 AXLP30530 894 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 MYL6P60660 151 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 CUL3Q13618 768 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 NCOA4Q13772 614 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 XKR4Q5GH76 650 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 USP37Q86T82 979 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 PALB2Q86YC2 1186 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 FAM71AQ8IYT1 594 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 B4GALNT2Q8NHY0 566 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 SLC30A5Q8TAD4 765 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 FAM81AQ8TBF8 368 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 SHC3Q92529 594 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 ACAP3Q96P50 834 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 FMO2Q99518 471 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 EPAS1Q99814 870 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 TRIM7Q9C029 511 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 RNPEPL1Q9HAU8 725 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.01□□□□□ -1.29
TMC1-201ENST00000297784 CHCHD3Q9NX63 227 aaKnown RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 PRKAG3Q9UGI9 489 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 PADI3Q9ULW8 664 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 UTP11Q9Y3A2 253 aaKnown RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 IPPQ9Y573 584 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 RPS6KL1Q9Y6S9 549 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 EYSQ5T1H1 3165 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 ATP5HO75947 161 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 ASS1P00966 412 aaKnown RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 IMPDH2P12268 514 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms