RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 RASSF9O75901 435 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 ADRA2BP18089 450 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 EPHB2P29323 1055 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 IFI35P80217 286 aaPredicted RBP11.44□□□□□ -0.58
PBRM1-201ENST00000296302 TBL3Q12788 808 aaKnown RBP11.44□□□□□ -0.58
PBRM1-201ENST00000296302 TJAP1Q5JTD0 557 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 ZBTB49Q6ZSB9 765 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 TFB1MQ8WVM0 346 aaKnown RBP11.44□□□□□ -0.58
PBRM1-201ENST00000296302 PIK3R5Q8WYR1 880 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 TUBGCP3Q96CW5 907 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 ASIC4Q96FT7 647 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 RUSC1Q9BVN2 902 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 PCDH9Q9HC56 1237 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 ETAA1Q9NY74 926 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 SDR42E2A6NKP2 422 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 ZNF263O14978 683 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 RPL21P46778 160 aaKnown RBP11.44□□□□□ -0.58
PBRM1-201ENST00000296302 PPIDQ08752 370 aaKnown RBP11.44□□□□□ -0.58
PBRM1-201ENST00000296302 PTK2BQ14289 1009 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 SPDYAQ5MJ70 313 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 PDPK2PQ6A1A2 396 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 SH2D3AQ9BRG2 576 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 ZNF518BQ9C0D4 1074 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 MYLK2Q9H1R3 596 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 EHD4Q9H223 541 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 LMCD1Q9NZU5 365 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 PRR12Q9ULL5 1215 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 TBX20Q9UMR3 447 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 EFCAB14O75071 495 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 ZNF23P17027 643 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 OTUD4Q01804 1114 aaKnown RBP11.44□□□□□ -0.58
PBRM1-201ENST00000296302 CSTF3Q12996 717 aaKnown RBP11.44□□□□□ -0.58
PBRM1-201ENST00000296302 PDK2Q15119 407 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 PLEKHA7Q6IQ23 1121 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 DENND1BQ6P3S1 775 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 RDM1Q8NG50 284 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 OXNAD1Q96HP4 312 aaPredicted RBP11.44□□□□□ -0.58
PBRM1-201ENST00000296302 SPATA33Q96N06 139 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 NR1H4Q96RI1 486 aaPredicted RBP11.44□□□□□ -0.58
PBRM1-201ENST00000296302 ECSITQ9BQ95 431 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 RPS6KL1Q9Y6S9 549 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 SUPT3HB4E1H0 165 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 CYP2C8P10632 490 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 TFE3P19532 575 aaPredicted RBP11.44□□□□□ -0.58
PBRM1-201ENST00000296302 CASP4P49662 377 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 ITGB3BPQ13352 177 aaPredicted RBP11.44□□□□□ -0.58
PBRM1-201ENST00000296302 GIT2Q14161 759 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 AGAP9Q5VTM2 703 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 PCNX4Q63HM2 1172 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 SPOCD1Q6ZMY3 1216 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 GDPD5Q8WTR4 605 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 CNPY3Q9BT09 278 aa11.44□□□□□ -0.58
PBRM1-201ENST00000296302 MMTAG2Q9BU76 263 aaKnown RBP11.44□□□□□ -0.58
PBRM1-201ENST00000296302 MYO3AQ8NEV4 1616 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 EVPLLA8MZ36 301 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 MAFGO15525 162 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 AHCYL1O43865 530 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 KRT33BQ14525 404 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 KDELC2Q7Z4H8 507 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 FBXO33Q7Z6M2 555 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 DEFB107AQ8IZN7 70 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 KYQ8NBH2 561 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 APPL2Q8NEU8 664 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 ZNF668Q96K58 619 aaPredicted RBP11.43□□□□□ -0.58
PBRM1-201ENST00000296302 GCNAQ96QF7 691 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 AFF4Q9UHB7 1163 aaKnown RBP11.43□□□□□ -0.58
PBRM1-201ENST00000296302 CEMIPQ8WUJ3 1361 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 CCDC78A2IDD5 438 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 POLRMTO00411 1230 aaKnown RBP11.43□□□□□ -0.58
PBRM1-201ENST00000296302 SNX3O60493 162 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 GRAP2O75791 330 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 HIST1H2AGP0C0S8 130 aaPredicted RBP11.43□□□□□ -0.58
PBRM1-201ENST00000296302 HIST1H2ADP20671 130 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 TGM2P21980 687 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 CHRNB3Q05901 458 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 SPP2Q13103 211 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 MTFR1Q15390 333 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 ZFP1Q6P2D0 407 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 CCDC81Q6ZN84 652 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 HIST1H2AHQ96KK5 128 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 HIST1H2AJQ99878 128 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 H2AFJQ9BTM1 129 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 DCLK3Q9C098 648 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 TMEM161AQ9NX61 479 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 PCDHGC5Q9Y5F6 944 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 PDIA6Q15084 440 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 KIZQ2M2Z5 673 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 CYP4A22Q5TCH4 519 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 ZNF662Q6ZS27 426 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 BBS7Q8IWZ6 715 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 SP8Q8IXZ3 490 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 USP33Q8TEY7 942 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 AGAP11Q8TF27 550 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 TMEM237Q96Q45 408 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 TMEM245Q9H330 911 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 FAM237AA0A1B0GTK4 181 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 C5orf58C9J3I9 102 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 PRR23D1E9PI22 279 aaPredicted RBP11.43□□□□□ -0.58
PBRM1-201ENST00000296302 MSH4O15457 936 aa11.43□□□□□ -0.58
PBRM1-201ENST00000296302 MED24O75448 989 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms