RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 ZCCHC23Q6ZST2 131 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 FEZF2Q8TBJ5 459 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 STRA6Q9BX79 667 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 WWP1Q9H0M0 922 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 PPCSQ9HAB8 311 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 DDX43Q9NXZ2 648 aaKnown RBP10.74□□□□□ -0.69
LMX1A-201ENST00000294816 IL1RAPL1Q9NZN1 696 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 NYAP2Q9P242 653 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 PCDHAC2Q9Y5I4 1007 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 CYB561D2O14569 222 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 ATP6V1B1P15313 513 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 PEX2P28328 305 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 GNA15P30679 374 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 INHBCP55103 352 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 DLG1Q12959 904 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 NCOA4Q13772 614 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 ABCB5Q2M3G0 1257 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 RABGAP1LQ5R372 815 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 ACAD11Q709F0 780 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 DHDDSQ86SQ9 333 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 PPIL6Q8IXY8 311 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 CERS5Q8N5B7 392 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 CEP70Q8NHQ1 597 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 GDPD5Q8WTR4 605 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 SRPK1Q96SB4 655 aaKnown RBP10.73□□□□□ -0.69
LMX1A-201ENST00000294816 SENP7Q9BQF6 1050 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 PCDH9Q9HC56 1237 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 EXOC7Q9UPT5 735 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 ZHX2Q9Y6X8 837 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 DDTLA6NHG4 134 aaPredicted RBP10.73□□□□□ -0.69
LMX1A-201ENST00000294816 HNRNPDLO14979 420 aaKnown RBP10.73□□□□□ -0.69
LMX1A-201ENST00000294816 TOM1L1O75674 476 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 RPS6KA4O75676 772 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 GH2P01242 217 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 CRABP2P29373 138 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 ELK3P41970 407 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 GRIA2P42262 883 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 ZNF200P98182 395 aaPredicted RBP10.73□□□□□ -0.69
LMX1A-201ENST00000294816 OTUD4Q01804 1114 aaKnown RBP10.73□□□□□ -0.69
LMX1A-201ENST00000294816 BMPR2Q13873 1038 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 MON1BQ7L1V2 547 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 AMIGO3Q86WK7 504 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 CRLF3Q8IUI8 442 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 NUDCD3Q8IVD9 361 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 ACTL9Q8TC94 416 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 CPT1BQ92523 772 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 E2F7Q96AV8 911 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 APOL6Q9BWW8 343 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 TMEM165Q9HC07 324 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 SSU72Q9NP77 194 aaKnown RBP10.73□□□□□ -0.69
LMX1A-201ENST00000294816 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.73□□□□□ -0.69
LMX1A-201ENST00000294816 ZNF862O60290 1169 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 SORBS2O94875 1100 aaKnown RBP10.73□□□□□ -0.69
LMX1A-201ENST00000294816 TPP2P29144 1249 aaPredicted RBP10.73□□□□□ -0.69
LMX1A-201ENST00000294816 RARRES1P49788 294 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 PDE1BQ01064 536 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 PTP4A2Q12974 167 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 RALGPS1Q5JS13 557 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 KCNT1Q5JUK3 1230 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 EFHC1Q5JVL4 640 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 SDCCAG8Q86SQ7 713 aaPredicted RBP10.73□□□□□ -0.69
LMX1A-201ENST00000294816 USP37Q86T82 979 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.73□□□□□ -0.69
LMX1A-201ENST00000294816 TEKT1Q969V4 418 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 GCNAQ96QF7 691 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 EHMT1Q9H9B1 1298 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 HOMER2Q9NSB8 354 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 IP6K2Q9UHH9 426 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 TMCO1Q9UM00 188 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 SCINQ9Y6U3 715 aa10.73□□□□□ -0.69
LMX1A-201ENST00000294816 KBTBD13C9JR72 458 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 ITGA2BP08514 1039 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 PDK3Q15120 406 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 ZNF394Q53GI3 561 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 TCHHL1Q5QJ38 904 aaPredicted RBP10.72□□□□□ -0.69
LMX1A-201ENST00000294816 DNAJC24Q6P3W2 148 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 RBM44Q6ZP01 1051 aaKnown RBP10.72□□□□□ -0.69
LMX1A-201ENST00000294816 CDHR3Q6ZTQ4 885 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 LARGE2Q8N3Y3 721 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 KCTD17Q8N5Z5 321 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 FAM71DQ8N9W8 422 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 EBF4Q9BQW3 602 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 KLHL4Q9C0H6 718 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 S100A14Q9HCY8 104 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 STRIP2Q9ULQ0 834 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 CST8O60676 142 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 FKBP6O75344 327 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 TMEM63AO94886 807 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 TGDSO95455 350 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 WEE2P0C1S8 567 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 UQCRBP14927 111 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 VCLP18206 1134 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 RPL22P35268 128 aaKnown RBP10.72□□□□□ -0.69
LMX1A-201ENST00000294816 BPIFB4P59827 614 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 ATG16L1Q676U5 607 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 CIAPIN1Q6FI81 312 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 SIAH1Q8IUQ4 282 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 PIP4K2CQ8TBX8 421 aa10.72□□□□□ -0.69
LMX1A-201ENST00000294816 LENG1Q96BZ8 264 aaPredicted RBP10.72□□□□□ -0.69
LMX1A-201ENST00000294816 PARVAQ9NVD7 372 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms