RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 EFTUD2Q15029 972 aaKnown RBP eCLIP16.59■□□□□ 0.253e-7■■■■□ 23.7
NCKIPSD-201ENST00000294129 FAM49BQ9NUQ9 324 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 ASAP2O43150 1006 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 SSTR1P30872 391 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 CDH5P33151 784 aaPredicted RBP16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 MYO1EQ12965 1108 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 PPIL2Q13356 520 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 STAT4Q14765 748 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 AMHR2Q16671 573 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 KIZQ2M2Z5 673 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 GLRA4Q5JXX5 417 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 KIF12Q96FN5 646 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 SLC40A1Q9NP59 571 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 GPATCH2LQ9NWQ4 482 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 HES2Q9Y543 173 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 A0A0G2JMZ2 1700 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 C3orf70A6NLC5 250 aaPredicted RBP16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 KRT7P08729 469 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 SLC26A2P50443 739 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 PKN2Q16513 984 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 C9orf131Q5VYM1 1079 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 ILDR2Q71H61 639 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 PIGWQ7Z7B1 504 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 UNC45BQ8IWX7 931 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 CNPY4Q8N129 248 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 APOL6Q9BWW8 343 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 BCO2Q9BYV7 579 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 MROH8Q9H579 483 aa16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.59■□□□□ 0.25
NCKIPSD-201ENST00000294129 TCRBV7S3A2A0A539 114 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 CILPO75339 1184 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 HIF1AQ16665 826 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 BBS9Q3SYG4 887 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 RNASEH2BQ5TBB1 312 aaKnown RBP16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 FASTKD5Q7L8L6 764 aaKnown RBP16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 LPIN3Q9BQK8 851 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 USP18Q9UMW8 372 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 LRRC37A2A6NM11 1700 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 E5RJQ4 531 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 CDH6P55285 790 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 EIF3EP60228 445 aaKnown RBP16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 COPS2P61201 443 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 MSS51Q4VC12 460 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 C1orf228Q6PIY5 440 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 CENPUQ71F23 418 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 CCDC33Q8N5R6 958 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 CCHCR1Q8TD31 782 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 SPOCK2Q92563 424 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 NGRNQ9NPE2 291 aaKnown RBP16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 KCNH4Q9UQ05 1017 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 PPME1Q9Y570 386 aa16.58■□□□□ 0.24
NCKIPSD-201ENST00000294129 ASB14A6NK59 587 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 FNBP1LQ5T0N5 605 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 NIPA2Q8N8Q9 360 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 GPATCH11Q8N954 259 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 SPATA18Q8TC71 538 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 PEBP4Q96S96 227 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 LHX5Q9H2C1 402 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 PCDH9Q9HC56 1237 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 DPP3Q9NY33 737 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 TSPAN16Q9UKR8 245 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 H3BRB1 525 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 PPEF2O14830 753 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 SNX3O60493 162 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 ITGAVP06756 1048 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 PDGFRAP16234 1089 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 GCLCP48506 637 aaPredicted RBP16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 MORF4L2Q15014 288 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 TRPM8Q7Z2W7 1104 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 SLC35B2Q8TB61 432 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 PRCCQ92733 491 aaPredicted RBP16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 NKD2Q969F2 451 aaPredicted RBP16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 ACAP3Q96P50 834 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 MAK16Q9BXY0 300 aaKnown RBP16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 TUT1Q9H6E5 874 aaKnown RBP16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 ACTR5Q9H9F9 607 aaPredicted RBP16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 SCN1AP35498 2009 aa16.57■□□□□ 0.24
NCKIPSD-201ENST00000294129 GOLGA8RI6L899 631 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 RBP3P10745 1247 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 CYP3A5P20815 502 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 GCAP28676 217 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 RPL22P35268 128 aaKnown RBP16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 ACOT1Q86TX2 421 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 PYROXD1Q8WU10 500 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 RXFP2Q8WXD0 754 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 SLC10A4Q96EP9 437 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 KLF6Q99612 283 aaPredicted RBP16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 MIS12Q9H081 205 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 TRABDQ9H4I3 376 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 SNX9Q9Y5X1 595 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 A0A1W2PPM1 405 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 HCRTO43612 131 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 MCF2P10911 925 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 GPD2P43304 727 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 LAMC2Q13753 1193 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 TAPT1Q6NXT6 567 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 ARHGEF18Q6ZSZ5 1173 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 FAM183BPQ6ZVS7 135 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 CKAP2Q8WWK9 683 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms