RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 RC3H2Q9HBD1 1191 aaKnown RBP12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 SLC38A7Q9NVC3 462 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 MARCH5Q9NX47 278 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 NFU1Q9UMS0 254 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 STXBP5LQ9Y2K9 1186 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 ABHD14A-ACY1A0A1B0GW23 586 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 CYB561D2O14569 222 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 RAD51CO43502 376 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 CILPO75339 1184 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 PARNO95453 639 aaKnown RBP12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 FGBP02675 491 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 NOP2P46087 812 aaKnown RBP12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 ZNF132P52740 706 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 MYO1EQ12965 1108 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 LLGL2Q6P1M3 1020 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 B4GALNT4Q76KP1 1039 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 ACOT1Q86TX2 421 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 SYCE1Q8N0S2 351 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 SLC4A11Q8NBS3 891 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 C3orf20Q8ND61 904 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 ATP6V1G3Q96LB4 118 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 KRT12Q99456 494 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 GPR62Q9BZJ7 368 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 CWH43Q9H720 699 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 UBN1Q9NPG3 1134 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 FAM49BQ9NUQ9 324 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 NAGPAQ9UK23 515 aa12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 TTC7AQ9ULT0 858 aaPredicted RBP12.14□□□□□ -0.47
CHRNB3-201ENST00000289957 TSC2P49815 1807 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 PGRMC1O00264 195 aaKnown RBP12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 FERP16591 822 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 ATICP31939 592 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 MAGEA10P43363 369 aaPredicted RBP12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 FMO1Q01740 532 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 MTMR3Q13615 1198 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 PHLDB2Q86SQ0 1253 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 VPS36Q86VN1 386 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 RPUSD2Q8IZ73 545 aaKnown RBP12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 ARFGAP2Q8N6H7 521 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 TPCN2Q8NHX9 752 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 SLC30A5Q8TAD4 765 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 URGCPQ8TCY9 931 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 BCAS4Q8TDM0 211 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 SEC14L1Q92503 715 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 LRRC45Q96CN5 670 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 ZNF689Q96CS4 500 aaPredicted RBP12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 RTP3Q9BQQ7 232 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 VN1R3Q9BXE9 311 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 SEPT11Q9NVA2 429 aaKnown RBP12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 MRPL42Q9Y6G3 142 aaKnown RBP12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 TBXAS1P24557 533 aaPredicted RBP12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 TKTP29401 623 aaKnown RBP12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 ECHS1P30084 290 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 CCT5P48643 541 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 YTHDF3Q7Z739 585 aaKnown RBP12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 OR6B3Q8NGW1 331 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 RHOBTB2Q9BYZ6 727 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 TMBIM4Q9HC24 238 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 TJP2Q9UDY2 1190 aa12.13□□□□□ -0.47
CHRNB3-201ENST00000289957 XPOTO43592 962 aaKnown RBP12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 GALTP07902 379 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 FAM153BP0C7A2 387 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 NR1D1P20393 614 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 GNA15P30679 374 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 PPIGQ13427 754 aaKnown RBP eCLIP12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 FAM153CQ494X1 144 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 AGBL2Q5U5Z8 902 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 ADGRF2Q8IZF7 708 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 HTATIP2Q9BUP3 242 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 GDAP2Q9NXN4 497 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 FAM153AQ9UHL3 310 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 CNTN6Q9UQ52 1028 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 FAM169AQ9Y6X4 670 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 KIAA1671Q9BY89 1806 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 ATMINO43313 823 aaPredicted RBP12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 STAU1O95793 577 aaKnown RBP12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 AMHP03971 560 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 OR4Q2P0C623 313 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 LINC00271P0C7V0 271 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 CCDC130P13994 396 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 CD19P15391 556 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 RFX1P22670 979 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 CLUL1Q15846 466 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 PPP2R5EQ16537 467 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 SV2CQ496J9 727 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 ALKBH5Q6P6C2 394 aaKnown RBP12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 DSTYKQ6XUX3 929 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 LIMS2Q7Z4I7 341 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 SUGP1Q8IWZ8 645 aaKnown RBP12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 APPL2Q8NEU8 664 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 RSPH1Q8WYR4 309 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 ZNF560Q96MR9 790 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 FAM193BQ96PV7 902 aaPredicted RBP12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 YME1L1Q96TA2 773 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 EPN3Q9H201 632 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 CYTH4Q9UIA0 394 aa12.12□□□□□ -0.47
CHRNB3-201ENST00000289957 PIK3R2O00459 728 aa12.11□□□□□ -0.47
CHRNB3-201ENST00000289957 CLDN5O00501 218 aa12.11□□□□□ -0.47
CHRNB3-201ENST00000289957 KCNK3O14649 394 aa12.11□□□□□ -0.47
CHRNB3-201ENST00000289957 THAP12O43422 761 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms