RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 PON2Q15165 354 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 SDK1Q7Z5N4 2213 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 RALGPS2Q86X27 583 aaPredicted RBP10.2□□□□□ -0.78
HMHB1-201ENST00000289448 PCED1BQ96HM7 432 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 KCTD10Q9H3F6 313 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 DPEP3Q9H4B8 488 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 TDP1Q9NUW8 608 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 GCNT4Q9P109 453 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 MAGEC2Q9UBF1 373 aaPredicted RBP10.2□□□□□ -0.78
HMHB1-201ENST00000289448 R3HCC1Q9Y3T6 440 aaKnown RBP10.2□□□□□ -0.78
HMHB1-201ENST00000289448 PCDHGA2Q9Y5H1 932 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 NUP210Q8TEM1 1887 aaPredicted RBP10.19□□□□□ -0.78
HMHB1-201ENST00000289448 FAM237AA0A1B0GTK4 181 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 C2orf78A6NCI8 922 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 LRRIQ3A6PVS8 624 aaPredicted RBP10.19□□□□□ -0.78
HMHB1-201ENST00000289448 KINO60870 393 aaKnown RBP10.19□□□□□ -0.78
HMHB1-201ENST00000289448 TACC1O75410 805 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 VNN1O95497 513 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 DDX6P26196 483 aaKnown RBP eCLIP10.19□□□□□ -0.78
HMHB1-201ENST00000289448 DLG4P78352 724 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 CLDN10P78369 228 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 PLCB2Q00722 1185 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 CYP27A1Q02318 531 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 CCINQ13939 588 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 ITPRIPL2Q3MIP1 535 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 WDR72Q3MJ13 1102 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 MDH1BQ5I0G3 518 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 TDRD10Q5VZ19 366 aaKnown RBP10.19□□□□□ -0.78
HMHB1-201ENST00000289448 NAIF1Q69YI7 327 aaPredicted RBP10.19□□□□□ -0.78
HMHB1-201ENST00000289448 C4orf50Q6ZRC1 276 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 KIAA2013Q8IYS2 634 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 ARL14EPQ8N8R7 260 aaPredicted RBP10.19□□□□□ -0.78
HMHB1-201ENST00000289448 OR6B3Q8NGW1 331 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 MYCBPAPQ8TBZ2 947 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 PARD3BQ8TEW8 1205 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 ATRIPQ8WXE1 791 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 MRPS31Q92665 395 aaKnown RBP10.19□□□□□ -0.78
HMHB1-201ENST00000289448 MSANTD3Q96H12 275 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 SPATA17Q96L03 361 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 SPATA32Q96LK8 384 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 SNX25Q9H3E2 840 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 GOLPH3LQ9H4A5 285 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 EBF3Q9H4W6 596 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 SMYD3Q9H7B4 428 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 FBRSL1Q9HCM7 1045 aaKnown RBP10.19□□□□□ -0.78
HMHB1-201ENST00000289448 EXOC1Q9NV70 894 aa10.19□□□□□ -0.78
HMHB1-201ENST00000289448 THG1LQ9NWX6 298 aaKnown RBP10.19□□□□□ -0.78
HMHB1-201ENST00000289448 CGNQ9P2M7 1197 aaKnown RBP10.19□□□□□ -0.78
HMHB1-201ENST00000289448 UXTQ9UBK9 157 aaPredicted RBP10.19□□□□□ -0.78
HMHB1-201ENST00000289448 NXF1Q9UBU9 619 aaKnown RBP10.19□□□□□ -0.78
HMHB1-201ENST00000289448 DENND4CQ5VZ89 1909 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 SOBPA7XYQ1 873 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 F8VP50 259 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 K7ESF4 209 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 CLDN5O00501 218 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 STAU1O95793 577 aaKnown RBP10.18□□□□□ -0.78
HMHB1-201ENST00000289448 C4BPAP04003 597 aaKnown RBP10.18□□□□□ -0.78
HMHB1-201ENST00000289448 FAM163BP0C2L3 166 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 PTPN1P18031 435 aaKnown RBP10.18□□□□□ -0.78
HMHB1-201ENST00000289448 GRIK1P39086 918 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 RAP1GAPP47736 663 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 CXCL12P48061 93 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 CCR3P51677 355 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 CDH8P55286 799 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 KRT85P78386 507 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 ZXDBP98169 803 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 PSMD2Q13200 908 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 RUNX3Q13761 415 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 ZNF268Q14587 947 aaPredicted RBP10.18□□□□□ -0.78
HMHB1-201ENST00000289448 MAPRE1Q15691 268 aaKnown RBP10.18□□□□□ -0.78
HMHB1-201ENST00000289448 ZNF77Q15935 545 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 C1orf220Q5T0J3 134 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 FSTL4Q6MZW2 842 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 PKN3Q6P5Z2 889 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 VSTM1Q6UX27 236 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 SLC9A9Q8IVB4 645 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 SPEM1Q8N4L4 309 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 TMEM174Q8WUU8 243 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 RUBCNQ92622 972 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 IER2Q9BTL4 223 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 B3GNT5Q9BYG0 378 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 ZNF518BQ9C0D4 1074 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 SDCBP2Q9H190 292 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 EPC1Q9H2F5 836 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 TRPC7Q9HCX4 862 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 POLR3BQ9NW08 1133 aaPredicted RBP10.18□□□□□ -0.78
HMHB1-201ENST00000289448 USP25Q9UHP3 1055 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 ZMYM5Q9UJ78 669 aa10.18□□□□□ -0.78
HMHB1-201ENST00000289448 OBSL1O75147 1896 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 KIF26AQ9ULI4 1882 aaPredicted RBP10.17□□□□□ -0.78
HMHB1-201ENST00000289448 LAMA1P25391 3075 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 TRAV19A0A0A6YYK7 116 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 ZNF840PA6NDX5 716 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 A8MXQ7 604 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 PDXKO00764 312 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 PHACTR2O75167 634 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 NR3C1P04150 777 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 RPN1P04843 607 aaKnown RBP10.17□□□□□ -0.78
HMHB1-201ENST00000289448 ATICP31939 592 aa10.17□□□□□ -0.78
HMHB1-201ENST00000289448 SYKP43405 635 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms