RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 DDHD1Q8NEL9 900 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 SHCBP1Q8NEM2 672 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 MYO1DO94832 1006 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 PTPN7P35236 360 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 KCNK10P57789 538 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 ITPK1Q13572 414 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 NT5DC1Q5TFE4 455 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 SPATA2LQ8IUW3 424 aaPredicted RBP15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 SUGP1Q8IWZ8 645 aaKnown RBP15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 C16orf96A6NNT2 1141 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 PTGER2P43116 358 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 EMC1Q8N766 993 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 GCNAQ96QF7 691 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 IARS2Q9NSE4 1012 aaKnown RBP15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 M0R3G1 203 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 KIAA0391O15091 583 aaKnown RBP15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 PSMC3P17980 439 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 SERPINB1P30740 379 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 RAP1GDS1P52306 607 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 THEMIS2Q5TEJ8 643 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 TTC39CQ8N584 583 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 TSPAN17Q96FV3 270 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 PRPF18Q99633 342 aaKnown RBP15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 IRF1P10914 325 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 TGM2P21980 687 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 PRR5LQ6MZQ0 368 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 EFCAB12Q6NXP0 572 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 HEATR4Q86WZ0 1026 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 TATDN2Q93075 761 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 MED15Q96RN5 788 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 APOL5Q9BWW9 433 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 C10orf88Q9H8K7 445 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 INTS13Q9NVM9 706 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 SLC8A2Q9UPR5 921 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 PIK3CDO00329 1044 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 CALCAP01258 141 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 CSE1LP55060 971 aaKnown RBP15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 GJC2Q5T442 439 aaPredicted RBP15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 HPDLQ96IR7 371 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 FBXO28Q9NVF7 368 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 TJP2Q9UDY2 1190 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 C15orf41Q9Y2V0 281 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 A0A0A6YYK5 440 aaPredicted RBP15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 TCRBV5S4A2TA0A5A2 114 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 NDUFS3O75489 264 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 RFC5P40937 340 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 GCLCP48506 637 aaPredicted RBP15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 HORMAD1Q86X24 394 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 TAS1R2Q8TE23 839 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 APOL2Q9BQE5 337 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 BRD8Q9H0E9 1235 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 DDX18Q9NVP1 670 aaKnown RBP15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 RPS6KL1Q9Y6S9 549 aa15.91■□□□□ 0.14
SHROOM4-201ENST00000289292 ZNF263O14978 683 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 USP1O94782 785 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 PDK1Q15118 436 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 OR6J1Q8NGC5 347 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 LZICQ8WZA0 190 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 TMEM39BQ9GZU3 492 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 ILKAPQ9H0C8 392 aaPredicted RBP15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 GJB6O95452 261 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 PKN2Q16513 984 aaKnown RBP15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 NUDT12Q9BQG2 462 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 DCLK3Q9C098 648 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 NINJ2Q9NZG7 142 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 PNMA3Q9UL41 463 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 GLRA3O75311 464 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 NPTXRO95502 500 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 CCDC103Q8IW40 242 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 CEP41Q9BYV8 373 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 RCCD1A6NED2 376 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 CTSHP09668 335 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 CLEC16AQ2KHT3 1053 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 GLRA4Q5JXX5 417 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 BNC2Q6ZN30 1099 aaPredicted RBP15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 TDRD5Q8NAT2 981 aaKnown RBP15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 KAT2BQ92831 832 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 CATSPER2Q96P56 530 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 SMAD5Q99717 465 aaKnown RBP15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 EXOSC4Q9NPD3 245 aaKnown RBP15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 PMPCBO75439 489 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 ALBP02768 609 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 RECQLP46063 649 aaPredicted RBP15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 WLSQ5T9L3 541 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 DEFB107AQ8IZN7 70 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 SNX31Q8N9S9 440 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 KLHL25Q9H0H3 589 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 TMEM161AQ9NX61 479 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 IL1RAPL1Q9NZN1 696 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 PKP3Q9Y446 797 aa15.9■□□□□ 0.14
SHROOM4-201ENST00000289292 LINC00854A0A1B0GVQ3 168 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 NCAM1P13591 858 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 ATP6V1E1P36543 226 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 GALNTL6Q49A17 601 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 DEPDC1Q5TB30 811 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 TCP10LQ8TDR4 215 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 PIK3C2BO00750 1634 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 PTPRUQ92729 1446 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 TRAPPC3O43617 180 aa15.89■□□□□ 0.13
SHROOM4-201ENST00000289292 WBP4O75554 376 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms