RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 ZNF75CPQ92670 426 aaPredicted RBP11.03□□□□□ -0.64
ERCC3-201ENST00000285398 VTI1AQ96AJ9 217 aa11.03□□□□□ -0.64
ERCC3-201ENST00000285398 FOXP3Q9BZS1 431 aa11.03□□□□□ -0.64
ERCC3-201ENST00000285398 ZFYVE28Q9HCC9 887 aa11.03□□□□□ -0.64
ERCC3-201ENST00000285398 TBC1D22BQ9NU19 505 aa11.03□□□□□ -0.64
ERCC3-201ENST00000285398 SLC9A2Q9UBY0 812 aa11.03□□□□□ -0.64
ERCC3-201ENST00000285398 CIDEBQ9UHD4 219 aa11.03□□□□□ -0.64
ERCC3-201ENST00000285398 F8W8V4 182 aa11.02□□□□□ -0.64
ERCC3-201ENST00000285398 FOXN3O00409 490 aaPredicted RBP11.02□□□□□ -0.64
ERCC3-201ENST00000285398 ZNF862O60290 1169 aa11.02□□□□□ -0.64
ERCC3-201ENST00000285398 LRRN2O75325 713 aa11.02□□□□□ -0.64
ERCC3-201ENST00000285398 DESP17661 470 aa11.02□□□□□ -0.64
ERCC3-201ENST00000285398 GAP43P17677 238 aa11.02□□□□□ -0.64
ERCC3-201ENST00000285398 RPA3P35244 121 aaPredicted RBP11.02□□□□□ -0.64
ERCC3-201ENST00000285398 CETN2P41208 172 aa11.02□□□□□ -0.64
ERCC3-201ENST00000285398 VEGFBP49765 207 aa11.02□□□□□ -0.64
ERCC3-201ENST00000285398 RTP1P59025 263 aa11.02□□□□□ -0.64
ERCC3-201ENST00000285398 SFSWAPQ12872 951 aaKnown RBP11.02□□□□□ -0.64
ERCC3-201ENST00000285398 THOC5Q13769 683 aaKnown RBP11.02□□□□□ -0.64
ERCC3-201ENST00000285398 GRB14Q14449 540 aa11.02□□□□□ -0.64
ERCC3-201ENST00000285398 C9orf72Q96LT7 481 aa11.02□□□□□ -0.64
ERCC3-201ENST00000285398 TUBGCP5Q96RT8 1024 aa11.02□□□□□ -0.64
ERCC3-201ENST00000285398 GRID1Q9ULK0 1009 aa11.02□□□□□ -0.64
ERCC3-201ENST00000285398 TNPO2O14787 897 aaKnown RBP11.02□□□□□ -0.65
ERCC3-201ENST00000285398 ADCY6O43306 1168 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 SNAI1O95863 264 aaPredicted RBP11.02□□□□□ -0.65
ERCC3-201ENST00000285398 CYP1A1P04798 512 aaPredicted RBP11.02□□□□□ -0.65
ERCC3-201ENST00000285398 PABPC4LP0CB38 370 aaKnown RBP11.02□□□□□ -0.65
ERCC3-201ENST00000285398 FAM200BP0CF97 657 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 TXNP10599 105 aaKnown RBP11.02□□□□□ -0.65
ERCC3-201ENST00000285398 TPP2P29144 1249 aaPredicted RBP11.02□□□□□ -0.65
ERCC3-201ENST00000285398 TM4SF4P48230 202 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 SCNN1BP51168 640 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 NOGQ13253 232 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 TRIP13Q15645 432 aaPredicted RBP11.02□□□□□ -0.65
ERCC3-201ENST00000285398 DBN1Q16643 649 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 IZUMO2Q6UXV1 221 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 KBTBD2Q8IY47 623 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 CCDC89Q8N998 374 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 WDR60Q8WVS4 1066 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 PPP2R3CQ969Q6 453 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 MAML3Q96JK9 1138 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 IKZF4Q9H2S9 585 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 SUDS3Q9H7L9 328 aaPredicted RBP11.02□□□□□ -0.65
ERCC3-201ENST00000285398 KIAA1586Q9HCI6 787 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 CREBZFQ9NS37 354 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 DNAJB4Q9UDY4 337 aa11.02□□□□□ -0.65
ERCC3-201ENST00000285398 WDR64B1ANS9 1081 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 FARP2O94887 1054 aaPredicted RBP11.01□□□□□ -0.65
ERCC3-201ENST00000285398 TRIM49P0CI25 452 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 TRIM49CP0CI26 452 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 ESRRAP11474 423 aaPredicted RBP11.01□□□□□ -0.65
ERCC3-201ENST00000285398 MAPK4P31152 587 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 MAGEA4P43358 317 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 C6orf163Q5TEZ5 329 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 XRRA1Q6P2D8 792 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 PHLDB2Q86SQ0 1253 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 ZNF564Q8TBZ8 553 aaPredicted RBP11.01□□□□□ -0.65
ERCC3-201ENST00000285398 GTF3C2Q8WUA4 911 aaPredicted RBP11.01□□□□□ -0.65
ERCC3-201ENST00000285398 PSPC1Q8WXF1 523 aaKnown RBP11.01□□□□□ -0.65
ERCC3-201ENST00000285398 POLR3CQ9BUI4 534 aaPredicted RBP11.01□□□□□ -0.65
ERCC3-201ENST00000285398 TRIM55Q9BYV6 548 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 PPCSQ9HAB8 311 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 ARL8BQ9NVJ2 186 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.01□□□□□ -0.65
ERCC3-201ENST00000285398 TBC1D30Q9Y2I9 924 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 STK24Q9Y6E0 443 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 CA12O43570 354 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 PFDN1O60925 122 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 DNAJC6O75061 913 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 LGR5O75473 907 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 TMCC1O94876 653 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 CCDC166P0CW27 439 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 GZMAP12544 262 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 CRABP2P29373 138 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 QARSP47897 775 aaKnown RBP11.01□□□□□ -0.65
ERCC3-201ENST00000285398 NEK3P51956 506 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 ZBTB16Q05516 673 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 KRT72Q14CN4 511 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 SEPT7Q16181 437 aaKnown RBP11.01□□□□□ -0.65
ERCC3-201ENST00000285398 CPNE8Q86YQ8 564 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 LMO3Q8TAP4 145 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 FNBP1Q96RU3 617 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 RBM15Q96T37 977 aaKnown RBP eCLIP11.01□□□□□ -0.654e-6■□□□□ 11.3
ERCC3-201ENST00000285398 ECSITQ9BQ95 431 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 OSBPL8Q9BZF1 889 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 GPRC5CQ9NQ84 441 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 CHST7Q9NS84 486 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 DMAC2Q9NW81 257 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 TAS2R1Q9NYW7 299 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 NDUFA13Q9P0J0 144 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 HEY2Q9UBP5 337 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 DCTN4Q9UJW0 460 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 FRMD4BQ9Y2L6 1034 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 PCDHA10Q9Y5I2 948 aa11.01□□□□□ -0.65
ERCC3-201ENST00000285398 UBE4BO95155 1302 aa11□□□□□ -0.65
ERCC3-201ENST00000285398 STRNO43815 780 aa11□□□□□ -0.65
ERCC3-201ENST00000285398 P4HBP07237 508 aaKnown RBP11□□□□□ -0.65
ERCC3-201ENST00000285398 YWHABP31946 246 aaKnown RBP11□□□□□ -0.65
ERCC3-201ENST00000285398 PGM1P36871 562 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms