RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 NFE2Q16621 373 aaPredicted RBP23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 CFAP221Q4G0U5 840 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 CLEC20AQ6ZU45 233 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 CCDC170Q8IYT3 715 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 ZMIZ2Q8NF64 920 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 DNAI2Q9GZS0 605 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 NGRNQ9NPE2 291 aaKnown RBP23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 ABI2Q9NYB9 513 aaPredicted RBP23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 NAGPAQ9UK23 515 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 AKR1B10O60218 316 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 CDH5P33151 784 aaPredicted RBP23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 NOMO3P69849 1222 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 PDE4CQ08493 712 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 SPATA2LQ8IUW3 424 aaPredicted RBP23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 C1orf131Q8NDD1 294 aaKnown RBP23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 SLC35F5Q8WV83 523 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 CPA5Q8WXQ8 436 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 SECISBP2LQ93073 1101 aaKnown RBP23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 SMOQ99835 787 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 MED10Q9BTT4 135 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 DUSP16Q9BY84 665 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 PDCL3Q9H2J4 239 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 TTYH1Q9H313 450 aaPredicted RBP23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 DEF6Q9H4E7 631 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 KRT82Q9NSB4 513 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 ARHGAP6O43182 974 aa23.08■■□□□ 1.29
PDLIM3-203ENST00000284771 NDUFA10O95299 355 aa23.08■■□□□ 1.29
PDLIM3-203ENST00000284771 LCA5LO95447 670 aa23.08■■□□□ 1.29
PDLIM3-203ENST00000284771 NDUFV1P49821 464 aa23.08■■□□□ 1.29
PDLIM3-203ENST00000284771 ADCY1Q08828 1119 aa23.08■■□□□ 1.29
PDLIM3-203ENST00000284771 CLEC16AQ2KHT3 1053 aa23.08■■□□□ 1.29
PDLIM3-203ENST00000284771 HESX1Q9UBX0 185 aa23.08■■□□□ 1.29
PDLIM3-203ENST00000284771 SLC27A5Q9Y2P5 690 aa23.08■■□□□ 1.29
PDLIM3-203ENST00000284771 PCDHB5Q9Y5E4 795 aa23.08■■□□□ 1.29
PDLIM3-203ENST00000284771 TMCO5BA8MYB1 307 aa23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 AP1G2O75843 785 aa23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 GABBR2O75899 941 aa23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 ATF2P15336 505 aa23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 DUSP4Q13115 394 aa23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 NAA35Q5VZE5 725 aa23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 PMF1Q6P1K2 205 aa23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 ALKBH5Q6P6C2 394 aaKnown RBP23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 C4orf50Q6ZRC1 276 aa23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 TOGARAM2Q6ZUX3 1019 aa23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 FUBP3Q96I24 572 aaKnown RBP eCLIP23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 CSNK1G1Q9HCP0 422 aa23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 REXO2Q9Y3B8 237 aaKnown RBP23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 COL4A4P53420 1690 aaPredicted RBP23.07■■□□□ 1.28
PDLIM3-203ENST00000284771 SEC24AO95486 1093 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 GZMAP12544 262 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 NPR3P17342 541 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 ANXA13P27216 316 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 DEKP35659 375 aaKnown RBP23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 MAP3K7CLP57077 242 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 SMARCB1Q12824 385 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 LILRA6Q6PI73 481 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 VPS36Q86VN1 386 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 SMARCD1Q96GM5 515 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 TJP2Q9UDY2 1190 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 AFF4Q9UHB7 1163 aaKnown RBP23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 PLXNA3P51805 1871 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 EIF3CLB5ME19 914 aaKnown RBP23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 TGM5O43548 720 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 SOAT2O75908 522 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 LSM8O95777 96 aaKnown RBP23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 SPATA31D3P0C874 917 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 FAM200BP0CF97 657 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 BCAT1P54687 386 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 CREMQ03060 361 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 CENPCQ03188 943 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 BST2Q10589 180 aaKnown RBP23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 C2CD6Q53TS8 623 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 TPGS2Q68CL5 300 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 TRIM72Q6ZMU5 477 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 SPATA31D4Q6ZUB0 917 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 ADGRD2Q7Z7M1 963 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 TMEM35BQ8NCS4 154 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 ACRBPQ8NEB7 543 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 SPPL2BQ8TCT7 592 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 EIF3CQ99613 913 aaKnown RBP23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 DESI2Q9BSY9 194 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 ISCUQ9H1K1 167 aa23.06■■□□□ 1.28
PDLIM3-203ENST00000284771 REV3LO60673 3130 aa23.05■■□□□ 1.28
PDLIM3-203ENST00000284771 HHLA1C9JL84 531 aa23.05■■□□□ 1.28
PDLIM3-203ENST00000284771 CYLC1P35663 651 aaPredicted RBP23.05■■□□□ 1.28
PDLIM3-203ENST00000284771 GPR15P49685 360 aa23.05■■□□□ 1.28
PDLIM3-203ENST00000284771 CCDC122Q5T0U0 273 aa23.05■■□□□ 1.28
PDLIM3-203ENST00000284771 ACAD10Q6JQN1 1059 aa23.05■■□□□ 1.28
PDLIM3-203ENST00000284771 PIGZQ86VD9 579 aa23.05■■□□□ 1.28
PDLIM3-203ENST00000284771 C2orf15Q8WU43 125 aaKnown RBP23.05■■□□□ 1.28
PDLIM3-203ENST00000284771 LRCH3Q96II8 777 aa23.05■■□□□ 1.28
PDLIM3-203ENST00000284771 CPXM1Q96SM3 734 aa23.05■■□□□ 1.28
PDLIM3-203ENST00000284771 EMILIN2Q9BXX0 1053 aa23.05■■□□□ 1.28
PDLIM3-203ENST00000284771 LMAN2LQ9H0V9 348 aa23.05■■□□□ 1.28
PDLIM3-203ENST00000284771 ABCB6Q9NP58 842 aa23.05■■□□□ 1.28
PDLIM3-203ENST00000284771 F8VP50 259 aa23.04■■□□□ 1.28
PDLIM3-203ENST00000284771 PER2O15055 1255 aa23.04■■□□□ 1.28
PDLIM3-203ENST00000284771 ADH1AP07327 375 aa23.04■■□□□ 1.28
PDLIM3-203ENST00000284771 KLRC2P26717 231 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms