RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 EVA1BQ9NVM1 165 aa13.69□□□□□ -0.22
SMARCA5-201ENST00000283131 STK39Q9UEW8 545 aa13.69□□□□□ -0.22
SMARCA5-201ENST00000283131 MGAT4AQ9UM21 535 aa13.69□□□□□ -0.22
SMARCA5-201ENST00000283131 E2F8A0AVK6 867 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 ADCY6O43306 1168 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 CPSF4O95639 269 aaKnown RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 SNRPAP09012 282 aaKnown RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 PBLDP30039 288 aaPredicted RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 CDK8P49336 464 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 PEX5P50542 639 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 RBP5P82980 135 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 FAM83BQ5T0W9 1011 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 C3orf62Q6ZUJ4 267 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 APOBEC3FQ8IUX4 373 aaKnown RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 RFFLQ8WZ73 363 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 SENP7Q9BQF6 1050 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 MLPHQ9BV36 600 aaPredicted RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 OSGEPL1Q9H4B0 414 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 DLGAP2Q9P1A6 1054 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 PHF11Q9UIL8 331 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 TSPAN9O75954 239 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 CLUP10909 449 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 PCSK1P29120 753 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 CBX5P45973 191 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 LRRC74BQ6ZQY2 392 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 MARK2Q7KZI7 788 aaKnown RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 GPT2Q8TD30 523 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 MARK1Q9P0L2 795 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 PAK5Q9P286 719 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 ACADSBP45954 432 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 RAD23AP54725 363 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 ATP8B4Q8TF62 1192 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 SEC16BQ96JE7 1060 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 ILKAPQ9H0C8 392 aaPredicted RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 INTS2Q9H0H0 1204 aaKnown RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 AHSPQ9NZD4 102 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 SAE1Q9UBE0 346 aaPredicted RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 SYNPO2Q9UMS6 1093 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 USP17L8P0C7I0 530 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 BYSLQ13895 437 aaKnown RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 SMCO1Q147U7 214 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 SPANXN2Q5MJ10 180 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 C10orf120Q5SQS8 335 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 FBXO38Q6PIJ6 1188 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 P4HBP07237 508 aaKnown RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 STIP1P31948 543 aaKnown RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 NAPEPLDQ6IQ20 393 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 FAM20CQ8IXL6 584 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 CCDC185Q8N715 623 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 USP7Q93009 1102 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 C6orf62Q9GZU0 229 aaPredicted RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 CHORDC1Q9UHD1 332 aaPredicted RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 E7ENQ6 273 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 ECE2O60344 883 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 ALDH9A1P49189 494 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 ZCWPW2Q504Y3 356 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 PGBD2Q6P3X8 592 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 GLB1LQ6UWU2 654 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 C4orf22Q6V702 233 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 RUBCNQ92622 972 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 HAVCR1Q96D42 359 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 SGSM3Q96HU1 749 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 CCDC177Q9NQR7 707 aaPredicted RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 NDUFA13Q9P0J0 144 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 PRKAG3Q9UGI9 489 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 BCLAF3A2AJT9 711 aaKnown RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 PDGFRAP16234 1089 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 PDIA6Q15084 440 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 SCARA3Q6AZY7 606 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 MRNIPQ6NTE8 343 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 SLC13A5Q86YT5 568 aaPredicted RBP13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 MNTQ99583 582 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 APOL4Q9BPW4 351 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 NEU2Q9Y3R4 380 aa13.68□□□□□ -0.22
SMARCA5-201ENST00000283131 FANCAO15360 1455 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 SKAP2O75563 359 aaPredicted RBP13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 AMPD2Q01433 879 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 ZNF177Q13360 481 aaPredicted RBP13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 TDRD10Q5VZ19 366 aaKnown RBP13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 FAM117BQ6P1L5 589 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 PJA1Q8NG27 643 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 TMEM138Q9NPI0 162 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 IL1RAPL1Q9NZN1 696 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 SYCP2Q9BX26 1530 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 GAS2L3Q86XJ1 694 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 CRELD1Q96HD1 420 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 RNPC3Q96LT9 517 aaKnown RBP13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 RBM15Q96T37 977 aaKnown RBP eCLIP13.67□□□□□ -0.221e-6■■■■□ 21.5
SMARCA5-201ENST00000283131 VPS51Q9UID3 782 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 DUSP12Q9UNI6 340 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 USP17L5A8MUK1 530 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 MAPK9P45984 424 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 TRAP1Q12931 704 aaKnown RBP13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 PRKAA1Q13131 559 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 MSANTD1Q6ZTZ1 278 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 HOMEZQ8IX15 550 aa13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 DCP1BQ8IZD4 617 aaKnown RBP13.67□□□□□ -0.22
SMARCA5-201ENST00000283131 SIX5Q8N196 739 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms